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Protein

Heat shock factor protein HSF30

Gene

HSF30

Organism
Solanum peruvianum (Peruvian tomato) (Lycopersicon peruvianum)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

DNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi29 – 123By similarityAdd BLAST95

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processStress response, Transcription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Heat shock factor protein HSF30
Alternative name(s):
Heat shock transcription factor 30
Short name:
HSTF 30
Heat stress transcription factor
Gene namesi
Name:HSF30
OrganismiSolanum peruvianum (Peruvian tomato) (Lycopersicon peruvianum)
Taxonomic identifieri4082 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001245901 – 351Heat shock factor protein HSF30Add BLAST351

Post-translational modificationi

Exhibits temperature-dependent phosphorylation.By similarity

Keywords - PTMi

Phosphoprotein

Interactioni

Subunit structurei

Homotrimer.

Structurei

3D structure databases

ProteinModelPortaliP41152.
SMRiP41152.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi167 – 170Poly-Gln4
Compositional biasi315 – 318Poly-Val4

Sequence similaritiesi

Belongs to the HSF family.Curated

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR000232. HSF_DNA-bd.
IPR027725. HSF_fam.
IPR011991. WHTH_DNA-bd_dom.
PANTHERiPTHR10015. PTHR10015. 1 hit.
PfamiView protein in Pfam
PF00447. HSF_DNA-bind. 1 hit.
PRINTSiPR00056. HSFDOMAIN.
SMARTiView protein in SMART
SM00415. HSF. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS00434. HSF_DOMAIN. 1 hit.

Sequencei

Sequence statusi: Complete.

P41152-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEDVMKVKVE EDGIPTAVLP MEGLHDVGPP PFLSKTYEMV EDSSTDQVIS
60 70 80 90 100
WSTTRNSFIV WDSHKFSTTL LPRFFKHSNF SSFIRQLNTY GFRKVDPDRW
110 120 130 140 150
EFANEGFLGG QKHLLKTIKR RRNVGQSMNQ QGSGACIEIG YYGMEEELER
160 170 180 190 200
LKRDKNVLMT EIVKLRQQQQ STRNQIIAMG EKIETQERKQ VQMMSFLAKI
210 220 230 240 250
FSNPTFLQQY LDKQVHRKDK QRIEVGQKRR LTMTPSVTGS DQPMNYSSSL
260 270 280 290 300
QESEAELASI EMLFSAAMDN ESSSNVRPDS VVTANGTDME PVADDIWEEL
310 320 330 340 350
LSEDLISGDR AAEEVVVVEQ PEFDVEVEDL VVKTPEWGEE LQDLVDQLGF

L
Length:351
Mass (Da):40,179
Last modified:February 1, 1995 - v1
Checksum:i908F2CACA1FB6A44
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X67601 mRNA. Translation: CAA47870.1.
PIRiS25480.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X67601 mRNA. Translation: CAA47870.1.
PIRiS25480.

3D structure databases

ProteinModelPortaliP41152.
SMRiP41152.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR000232. HSF_DNA-bd.
IPR027725. HSF_fam.
IPR011991. WHTH_DNA-bd_dom.
PANTHERiPTHR10015. PTHR10015. 1 hit.
PfamiView protein in Pfam
PF00447. HSF_DNA-bind. 1 hit.
PRINTSiPR00056. HSFDOMAIN.
SMARTiView protein in SMART
SM00415. HSF. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS00434. HSF_DOMAIN. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiHSF30_SOLPE
AccessioniPrimary (citable) accession number: P41152
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: February 15, 2017
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.