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P41107

- RL10_BRUAB

UniProt

P41107 - RL10_BRUAB

Protein

50S ribosomal protein L10

Gene

rplJ

Organism
Brucella abortus biovar 1 (strain 9-941)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 79 (01 Oct 2014)
      Sequence version 3 (21 Jun 2005)
      Previous versions | rss
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    Functioni

    Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.By similarity

    GO - Molecular functioni

    1. large ribosomal subunit rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. ribosome biogenesis Source: InterPro
    2. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciBABO262698:GJC2-1272-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L10
    Gene namesi
    Name:rplJ
    Ordered Locus Names:BruAb1_1250
    OrganismiBrucella abortus biovar 1 (strain 9-941)
    Taxonomic identifieri262698 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
    ProteomesiUP000000540: Chromosome I

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 17217250S ribosomal protein L10PRO_0000154599Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex By similarity.By similarity

    Protein-protein interaction databases

    STRINGi262698.BruAb1_1250.

    Structurei

    3D structure databases

    ProteinModelPortaliP41107.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L10P family.Curated

    Phylogenomic databases

    eggNOGiCOG0244.
    HOGENOMiHOG000004852.
    KOiK02864.
    OMAiATSESHK.
    OrthoDBiEOG6DNTDR.

    Family and domain databases

    HAMAPiMF_00362. Ribosomal_L10.
    InterProiIPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    IPR002363. Ribosomal_L10_eubac_CS.
    [Graphical view]
    PfamiPF00466. Ribosomal_L10. 1 hit.
    [Graphical view]
    PROSITEiPS01109. RIBOSOMAL_L10. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P41107-1 [UniParc]FASTAAdd to Basket

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    MDRAEKREFV AWLNGAFKES GSVVVAHYTG LTVAQMSDLR SKMRDAGGSV    50
    KVAKNRLAKI ALQGTESEGI VDLFTGQTVV AYANDPITAP KVAVEFAKAN 100
    DKLVILGGAM GATTLNADGV KSLASLPSLD ELRAKLVGMI QTPAQRLAVL 150
    TSAPAGQIAR VIGAHARKNE AA 172
    Length:172
    Mass (Da):17,973
    Last modified:June 21, 2005 - v3
    Checksum:i5DC5A40297E6E065
    GO

    Sequence cautioni

    The sequence AAA23000.1 differs from that shown. Reason: Frameshift at position 116.

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti71 – 711V → A in AAA23000. (PubMed:8125331)Curated
    Sequence conflicti124 – 1241A → R(PubMed:8125331)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017223 Genomic DNA. Translation: AAX74588.1.
    L23505 Genomic DNA. Translation: AAA23000.1. Frameshift.
    PIRiI40349.
    RefSeqiWP_011265350.1. NC_006932.1.
    YP_221949.1. NC_006932.1.

    Genome annotation databases

    EnsemblBacteriaiAAX74588; AAX74588; BruAb1_1250.
    GeneIDi3340092.
    KEGGibmb:BruAb1_1250.
    PATRICi17824192. VBIBruAbo15061_1318.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017223 Genomic DNA. Translation: AAX74588.1 .
    L23505 Genomic DNA. Translation: AAA23000.1 . Frameshift.
    PIRi I40349.
    RefSeqi WP_011265350.1. NC_006932.1.
    YP_221949.1. NC_006932.1.

    3D structure databases

    ProteinModelPortali P41107.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262698.BruAb1_1250.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAX74588 ; AAX74588 ; BruAb1_1250 .
    GeneIDi 3340092.
    KEGGi bmb:BruAb1_1250.
    PATRICi 17824192. VBIBruAbo15061_1318.

    Phylogenomic databases

    eggNOGi COG0244.
    HOGENOMi HOG000004852.
    KOi K02864.
    OMAi ATSESHK.
    OrthoDBi EOG6DNTDR.

    Enzyme and pathway databases

    BioCyci BABO262698:GJC2-1272-MONOMER.

    Family and domain databases

    HAMAPi MF_00362. Ribosomal_L10.
    InterProi IPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    IPR002363. Ribosomal_L10_eubac_CS.
    [Graphical view ]
    Pfami PF00466. Ribosomal_L10. 1 hit.
    [Graphical view ]
    PROSITEi PS01109. RIBOSOMAL_L10. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Completion of the genome sequence of Brucella abortus and comparison to the highly similar genomes of Brucella melitensis and Brucella suis."
      Halling S.M., Peterson-Burch B.D., Bricker B.J., Zuerner R.L., Qing Z., Li L.-L., Kapur V., Alt D.P., Olsen S.C.
      J. Bacteriol. 187:2715-2726(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 9-941.
    2. "Sequences of the rplJL operon containing the L10 and L7/L12 genes from Brucella abortus."
      Oliveira S.C., Zhu Y., Splitter G.A.
      Gene 140:137-138(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-143.
      Strain: 19.

    Entry informationi

    Entry nameiRL10_BRUAB
    AccessioniPrimary (citable) accession number: P41107
    Secondary accession number(s): Q57CP6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: June 21, 2005
    Last modified: October 1, 2014
    This is version 79 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Brucella abortus strain 9-941
      Brucella abortus (strain 9-941): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3