Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P41107 (RL10_BRUAB) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L10
Gene names
Name:rplJ
Ordered Locus Names:BruAb1_1250
OrganismBrucella abortus biovar 1 (strain 9-941) [Complete proteome] [HAMAP]
Taxonomic identifier262698 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length172 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors By similarity. HAMAP-Rule MF_00362

Subunit structure

Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex By similarity.

Sequence similarities

Belongs to the ribosomal protein L10P family.

Sequence caution

The sequence AAA23000.1 differs from that shown. Reason: Frameshift at position 116.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processribosome biogenesis

Inferred from electronic annotation. Source: InterPro

translation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionLSU rRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 17217250S ribosomal protein L10 HAMAP-Rule MF_00362
PRO_0000154599

Experimental info

Sequence conflict711V → A in AAA23000. Ref.2
Sequence conflict1241A → R Ref.2

Sequences

Sequence LengthMass (Da)Tools
P41107 [UniParc].

Last modified June 21, 2005. Version 3.
Checksum: 5DC5A40297E6E065

FASTA17217,973
        10         20         30         40         50         60 
MDRAEKREFV AWLNGAFKES GSVVVAHYTG LTVAQMSDLR SKMRDAGGSV KVAKNRLAKI 

        70         80         90        100        110        120 
ALQGTESEGI VDLFTGQTVV AYANDPITAP KVAVEFAKAN DKLVILGGAM GATTLNADGV 

       130        140        150        160        170 
KSLASLPSLD ELRAKLVGMI QTPAQRLAVL TSAPAGQIAR VIGAHARKNE AA 

« Hide

References

« Hide 'large scale' references
[1]"Completion of the genome sequence of Brucella abortus and comparison to the highly similar genomes of Brucella melitensis and Brucella suis."
Halling S.M., Peterson-Burch B.D., Bricker B.J., Zuerner R.L., Qing Z., Li L.-L., Kapur V., Alt D.P., Olsen S.C.
J. Bacteriol. 187:2715-2726(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 9-941.
[2]"Sequences of the rplJL operon containing the L10 and L7/L12 genes from Brucella abortus."
Oliveira S.C., Zhu Y., Splitter G.A.
Gene 140:137-138(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-143.
Strain: 19.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017223 Genomic DNA. Translation: AAX74588.1.
L23505 Genomic DNA. Translation: AAA23000.1. Frameshift.
PIRI40349.
RefSeqYP_221949.1. NC_006932.1.

3D structure databases

ProteinModelPortalP41107.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262698.BruAb1_1250.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAX74588; AAX74588; BruAb1_1250.
GeneID3340092.
KEGGbmb:BruAb1_1250.
PATRIC17824192. VBIBruAbo15061_1318.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0244.
HOGENOMHOG000004852.
KOK02864.
OMAATSESHK.
OrthoDBEOG6DNTDR.

Enzyme and pathway databases

BioCycBABO262698:GJC2-1272-MONOMER.

Family and domain databases

HAMAPMF_00362. Ribosomal_L10.
InterProIPR022973. Ribosomal_L10.
IPR001790. Ribosomal_L10/acidic_P0.
IPR002363. Ribosomal_L10_eubac_CS.
[Graphical view]
PfamPF00466. Ribosomal_L10. 1 hit.
[Graphical view]
PROSITEPS01109. RIBOSOMAL_L10. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL10_BRUAB
AccessionPrimary (citable) accession number: P41107
Secondary accession number(s): Q57CP6
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: June 21, 2005
Last modified: June 11, 2014
This is version 77 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Brucella abortus strain 9-941

Brucella abortus (strain 9-941): entries and gene names