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P41095

- RLA0_ORYSJ

UniProt

P41095 - RLA0_ORYSJ

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Protein

60S acidic ribosomal protein P0

Gene

Os08g0130500

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli

Functioni

Ribosomal protein P0 is the functional equivalent of E.coli protein L10.

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. ribosome biogenesis Source: InterPro
  2. translational elongation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiREACT_208864. SRP-dependent cotranslational protein targeting to membrane.
REACT_209617. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
REACT_216478. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
REACT_244456. Peptide chain elongation.
REACT_250244. Formation of a pool of free 40S subunits.
REACT_254990. GTP hydrolysis and joining of the 60S ribosomal subunit.
REACT_257481. Eukaryotic Translation Termination.
REACT_263728. L13a-mediated translational silencing of Ceruloplasmin expression.

Names & Taxonomyi

Protein namesi
Recommended name:
60S acidic ribosomal protein P0
Gene namesi
Ordered Locus Names:Os08g0130500, LOC_Os08g03640
ORF Names:P0582D05.130-1
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 8

Organism-specific databases

GrameneiP41095.

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed1 Publication
Chaini2 – 31931860S acidic ribosomal protein P0PRO_0000154781Add
BLAST

Post-translational modificationi

Phosphorylated.By similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiP41095.
PRIDEiP41095.

Expressioni

Gene expression databases

ExpressionAtlasiP41095. baseline.

Interactioni

Subunit structurei

P0 forms a pentameric complex by interaction with dimers of P1 and P2.By similarity

Structurei

3D structure databases

ProteinModelPortaliP41095.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L10P family.Curated

Phylogenomic databases

eggNOGiCOG0244.
HOGENOMiHOG000210987.
InParanoidiP41095.
KOiK02941.
OMAiGILATEM.

Family and domain databases

InterProiIPR001790. Ribosomal_L10/acidic_P0.
IPR001813. Ribosomal_L10/L12.
[Graphical view]
PfamiPF00428. Ribosomal_60s. 1 hit.
PF00466. Ribosomal_L10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P41095-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAIKRTKAEK KVAYDKKLCQ LLDEYTKVLI AVADNVGSNQ LQEIRKGLRG
60 70 80 90 100
DSIVLMGKNT LIRRCIKVHA DNTGNKEFLE LMPLLVGNVG LIFTKGDLKE
110 120 130 140 150
VREEVAKYKV GAPARVGLVA PVDVVVPPGN TGLDPSQTSF FQVLNIPTKI
160 170 180 190 200
NKGTVEIITP VELIKKGDKV GSSESALLAK LGIRPFSYGL VITNVYDSGS
210 220 230 240 250
VFSPEVLDLT EDDLMEKFAS GVSMVASVSL AISYPTIAAA PHMFLNGYKN
260 270 280 290 300
VLAVAVETEY SYPHADKIKE YLKDPSKFAV AAPVAADSGA AAPSAAKEEE
310
KKEEPEEESD GDLGMSLFD
Length:319
Mass (Da):34,378
Last modified:January 23, 2007 - v3
Checksum:iF54E748B62C92DD7
GO

Sequence cautioni

The sequence BAD09642.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D21130 mRNA. Translation: BAA04668.1.
AP004591 Genomic DNA. Translation: BAC66723.1.
AP004591 Genomic DNA. Translation: BAD09642.1. Sequence problems.
PIRiT04309.
RefSeqiNP_001060923.1. NM_001067458.1.
UniGeneiOs.12290.

Genome annotation databases

EnsemblPlantsiOS08T0130500-01; OS08T0130500-01; OS08G0130500.
GeneIDi4344590.
KEGGiosa:4344590.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D21130 mRNA. Translation: BAA04668.1 .
AP004591 Genomic DNA. Translation: BAC66723.1 .
AP004591 Genomic DNA. Translation: BAD09642.1 . Sequence problems.
PIRi T04309.
RefSeqi NP_001060923.1. NM_001067458.1.
UniGenei Os.12290.

3D structure databases

ProteinModelPortali P41095.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi P41095.
PRIDEi P41095.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS08T0130500-01 ; OS08T0130500-01 ; OS08G0130500 .
GeneIDi 4344590.
KEGGi osa:4344590.

Organism-specific databases

Gramenei P41095.

Phylogenomic databases

eggNOGi COG0244.
HOGENOMi HOG000210987.
InParanoidi P41095.
KOi K02941.
OMAi GILATEM.

Enzyme and pathway databases

Reactomei REACT_208864. SRP-dependent cotranslational protein targeting to membrane.
REACT_209617. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
REACT_216478. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
REACT_244456. Peptide chain elongation.
REACT_250244. Formation of a pool of free 40S subunits.
REACT_254990. GTP hydrolysis and joining of the 60S ribosomal subunit.
REACT_257481. Eukaryotic Translation Termination.
REACT_263728. L13a-mediated translational silencing of Ceruloplasmin expression.

Gene expression databases

ExpressionAtlasi P41095. baseline.

Family and domain databases

InterProi IPR001790. Ribosomal_L10/acidic_P0.
IPR001813. Ribosomal_L10/L12.
[Graphical view ]
Pfami PF00428. Ribosomal_60s. 1 hit.
PF00466. Ribosomal_L10. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence of a rice acidic ribosomal phosphoprotein P0 cDNA."
    Hihara Y., Umeda M., Hara C., Toriyama K., Uchimiya H.
    Plant Physiol. 105:753-754(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Anther.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "Rice proteome database based on two-dimensional polyacrylamide gel electrophoresis: its status in 2003."
    Komatsu S., Kojima K., Suzuki K., Ozaki K., Higo K.
    Nucleic Acids Res. 32:D388-D392(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 2-9.
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiRLA0_ORYSJ
AccessioniPrimary (citable) accession number: P41095
Secondary accession number(s): Q7EZR2, Q7EZR7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: January 23, 2007
Last modified: November 26, 2014
This is version 81 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3