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P41095

- RLA0_ORYSJ

UniProt

P41095 - RLA0_ORYSJ

Protein

60S acidic ribosomal protein P0

Gene

Os08g0130500

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 79 (01 Oct 2014)
      Sequence version 3 (23 Jan 2007)
      Previous versions | rss
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    Functioni

    Ribosomal protein P0 is the functional equivalent of E.coli protein L10.

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. ribosome biogenesis Source: InterPro
    2. translational elongation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    ReactomeiREACT_208864. SRP-dependent cotranslational protein targeting to membrane.
    REACT_209617. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
    REACT_216478. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    60S acidic ribosomal protein P0
    Gene namesi
    Ordered Locus Names:Os08g0130500, LOC_Os08g03640
    ORF Names:P0582D05.130-1
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 8

    Organism-specific databases

    GrameneiP41095.

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11Removed1 Publication
    Chaini2 – 31931860S acidic ribosomal protein P0PRO_0000154781Add
    BLAST

    Post-translational modificationi

    Phosphorylated.By similarity

    Keywords - PTMi

    Phosphoprotein

    Proteomic databases

    PaxDbiP41095.
    PRIDEiP41095.

    Interactioni

    Subunit structurei

    P0 forms a pentameric complex by interaction with dimers of P1 and P2.By similarity

    Structurei

    3D structure databases

    ProteinModelPortaliP41095.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L10P family.Curated

    Phylogenomic databases

    eggNOGiCOG0244.
    HOGENOMiHOG000210987.
    KOiK02941.
    OMAiGILATEM.

    Family and domain databases

    InterProiIPR001790. Ribosomal_L10/acidic_P0.
    IPR001813. Ribosomal_L10/L12.
    [Graphical view]
    PfamiPF00428. Ribosomal_60s. 1 hit.
    PF00466. Ribosomal_L10. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P41095-1 [UniParc]FASTAAdd to Basket

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    MAIKRTKAEK KVAYDKKLCQ LLDEYTKVLI AVADNVGSNQ LQEIRKGLRG    50
    DSIVLMGKNT LIRRCIKVHA DNTGNKEFLE LMPLLVGNVG LIFTKGDLKE 100
    VREEVAKYKV GAPARVGLVA PVDVVVPPGN TGLDPSQTSF FQVLNIPTKI 150
    NKGTVEIITP VELIKKGDKV GSSESALLAK LGIRPFSYGL VITNVYDSGS 200
    VFSPEVLDLT EDDLMEKFAS GVSMVASVSL AISYPTIAAA PHMFLNGYKN 250
    VLAVAVETEY SYPHADKIKE YLKDPSKFAV AAPVAADSGA AAPSAAKEEE 300
    KKEEPEEESD GDLGMSLFD 319
    Length:319
    Mass (Da):34,378
    Last modified:January 23, 2007 - v3
    Checksum:iF54E748B62C92DD7
    GO

    Sequence cautioni

    The sequence BAD09642.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D21130 mRNA. Translation: BAA04668.1.
    AP004591 Genomic DNA. Translation: BAC66723.1.
    AP004591 Genomic DNA. Translation: BAD09642.1. Sequence problems.
    PIRiT04309.
    RefSeqiNP_001060923.1. NM_001067458.1.
    UniGeneiOs.12290.

    Genome annotation databases

    EnsemblPlantsiOS08T0130500-01; OS08T0130500-01; OS08G0130500.
    GeneIDi4344590.
    KEGGiosa:4344590.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D21130 mRNA. Translation: BAA04668.1 .
    AP004591 Genomic DNA. Translation: BAC66723.1 .
    AP004591 Genomic DNA. Translation: BAD09642.1 . Sequence problems.
    PIRi T04309.
    RefSeqi NP_001060923.1. NM_001067458.1.
    UniGenei Os.12290.

    3D structure databases

    ProteinModelPortali P41095.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PaxDbi P41095.
    PRIDEi P41095.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS08T0130500-01 ; OS08T0130500-01 ; OS08G0130500 .
    GeneIDi 4344590.
    KEGGi osa:4344590.

    Organism-specific databases

    Gramenei P41095.

    Phylogenomic databases

    eggNOGi COG0244.
    HOGENOMi HOG000210987.
    KOi K02941.
    OMAi GILATEM.

    Enzyme and pathway databases

    Reactomei REACT_208864. SRP-dependent cotranslational protein targeting to membrane.
    REACT_209617. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
    REACT_216478. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

    Family and domain databases

    InterProi IPR001790. Ribosomal_L10/acidic_P0.
    IPR001813. Ribosomal_L10/L12.
    [Graphical view ]
    Pfami PF00428. Ribosomal_60s. 1 hit.
    PF00466. Ribosomal_L10. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Nucleotide sequence of a rice acidic ribosomal phosphoprotein P0 cDNA."
      Hihara Y., Umeda M., Hara C., Toriyama K., Uchimiya H.
      Plant Physiol. 105:753-754(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Tissue: Anther.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "Rice proteome database based on two-dimensional polyacrylamide gel electrophoresis: its status in 2003."
      Komatsu S., Kojima K., Suzuki K., Ozaki K., Higo K.
      Nucleic Acids Res. 32:D388-D392(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 2-9.
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiRLA0_ORYSJ
    AccessioniPrimary (citable) accession number: P41095
    Secondary accession number(s): Q7EZR2, Q7EZR7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 79 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3