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P41095 (RLA0_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
60S acidic ribosomal protein P0
Gene names
Ordered Locus Names:Os08g0130500, LOC_Os08g03640
ORF Names:P0582D05.130-1
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length319 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Ribosomal protein P0 is the functional equivalent of E.coli protein L10.

Subunit structure

P0 forms a pentameric complex by interaction with dimers of P1 and P2 By similarity.

Post-translational modification

Phosphorylated By similarity.

Sequence similarities

Belongs to the ribosomal protein L10P family.

Sequence caution

The sequence BAD09642.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed Ref.3
Chain2 – 31931860S acidic ribosomal protein P0
PRO_0000154781

Sequences

Sequence LengthMass (Da)Tools
P41095 [UniParc].

Last modified January 23, 2007. Version 3.
Checksum: F54E748B62C92DD7

FASTA31934,378
        10         20         30         40         50         60 
MAIKRTKAEK KVAYDKKLCQ LLDEYTKVLI AVADNVGSNQ LQEIRKGLRG DSIVLMGKNT 

        70         80         90        100        110        120 
LIRRCIKVHA DNTGNKEFLE LMPLLVGNVG LIFTKGDLKE VREEVAKYKV GAPARVGLVA 

       130        140        150        160        170        180 
PVDVVVPPGN TGLDPSQTSF FQVLNIPTKI NKGTVEIITP VELIKKGDKV GSSESALLAK 

       190        200        210        220        230        240 
LGIRPFSYGL VITNVYDSGS VFSPEVLDLT EDDLMEKFAS GVSMVASVSL AISYPTIAAA 

       250        260        270        280        290        300 
PHMFLNGYKN VLAVAVETEY SYPHADKIKE YLKDPSKFAV AAPVAADSGA AAPSAAKEEE 

       310 
KKEEPEEESD GDLGMSLFD 

« Hide

References

« Hide 'large scale' references
[1]"Nucleotide sequence of a rice acidic ribosomal phosphoprotein P0 cDNA."
Hihara Y., Umeda M., Hara C., Toriyama K., Uchimiya H.
Plant Physiol. 105:753-754(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Tissue: Anther.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"Rice proteome database based on two-dimensional polyacrylamide gel electrophoresis: its status in 2003."
Komatsu S., Kojima K., Suzuki K., Ozaki K., Higo K.
Nucleic Acids Res. 32:D388-D392(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: PROTEIN SEQUENCE OF 2-9.
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D21130 mRNA. Translation: BAA04668.1.
AP004591 Genomic DNA. Translation: BAC66723.1.
AP004591 Genomic DNA. Translation: BAD09642.1. Sequence problems.
PIRT04309.
RefSeqNP_001060923.1. NM_001067458.1.
UniGeneOs.12290.

3D structure databases

ProteinModelPortalP41095.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PaxDbP41095.
PRIDEP41095.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS08T0130500-01; OS08T0130500-01; OS08G0130500.
GeneID4344590.
KEGGosa:4344590.

Organism-specific databases

GrameneP41095.

Phylogenomic databases

eggNOGCOG0244.
HOGENOMHOG000210987.
KOK02941.
OMAVMDARNL.
ProtClustDBCLSN2683388.

Family and domain databases

InterProIPR001790. Ribosomal_L10/acidic_P0.
IPR001813. Ribosomal_L10/L12.
[Graphical view]
PfamPF00428. Ribosomal_60s. 1 hit.
PF00466. Ribosomal_L10. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRLA0_ORYSJ
AccessionPrimary (citable) accession number: P41095
Secondary accession number(s): Q7EZR2, Q7EZR7
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: January 23, 2007
Last modified: April 16, 2014
This is version 76 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Ribosomal proteins

Ribosomal proteins families and list of entries