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P41087 (Y125_RICPR) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0176 protein RP125
Gene names
Ordered Locus Names:RP125
OrganismRickettsia prowazekii (strain Madrid E)
Taxonomic identifier272947 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length247 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0176 family.

Contains 1 rhodanese domain.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 247247UPF0176 protein RP125 HAMAP MF_00469
PRO_0000161505

Regions

Domain124 – 21895Rhodanese

Sequences

Sequence LengthMass (Da)Tools
P41087 [UniParc].

Last modified February 1, 1995. Version 1.
Checksum: 6F000B3C231158FC

FASTA24728,417
        10         20         30         40         50         60 
MNERITILSA YSFVNIIEPA NLIPKLLLVG KKKYIRGTIL LANEGFNSSF SGSYENVNIV 

        70         80         90        100        110        120 
LKQLIALTGS KDVNVKINYS PVHPFQKLKV RLKREIIAMN VKDLNVDVFK GHYIEPKDWD 

       130        140        150        160        170        180 
EFITKQNVIL IDTRNEYEID IGTFKSAINP RTETFKQFPA WVQQNHALLQ GKKIAMFCTG 

       190        200        210        220        230        240 
GIRCEKSTSL LKSIGYNEVY HLKGGILQYL EDTHNKNNLW QGKCFVFDDR RAVADDLYPA 


EGYWLHR 

« Hide

References

« Hide 'large scale' references
[1]Wood D.O.
Submitted (OCT-1993) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: Madrid E.
[2]"The genome sequence of Rickettsia prowazekii and the origin of mitochondria."
Andersson S.G.E., Zomorodipour A., Andersson J.O., Sicheritz-Ponten T., Alsmark U.C.M., Podowski R.M., Naeslund A.K., Eriksson A.-S., Winkler H.H., Kurland C.G.
Nature 396:133-140(1998) [PubMed: 9823893] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Madrid E.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U02603 Unassigned DNA. Translation: AAA18324.1.
AJ235270 Genomic DNA. Translation: CAA14594.1.
PIRC71722.
RefSeqNP_220517.1. NC_000963.1.

3D structure databases

ProteinModelPortalP41087.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID883753.
GenomeReviewsGene locus RP125 in contig AJ235269_GR.
KEGGrpr:RP125.
PATRIC17900990. VBIRicPro72556_0127.

Phylogenomic databases

HOGENOMHBG366219.
OMATETFKQF.
ProtClustDBPRK01415.

Enzyme and pathway databases

BioCycRPRO272947:RP125-MONOMER.

Family and domain databases

HAMAPMF_00469. UPF0176.
[Tree]
InterProIPR001763. Rhodanese-like.
IPR020936. UPF0176.
[Graphical view]
Gene3DG3DSA:3.40.250.10. Rhodanese-like. 1 hit.
KOK07146.
PfamPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMSSF52821. Rhodanese-like. 1 hit.
PROSITEPS50206. RHODANESE_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY125_RICPR
AccessionPrimary (citable) accession number: P41087
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: January 25, 2012
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

Rickettsia prowazekii

Rickettsia prowazekii (strain Madrid E): entries and gene names

SIMILARITY comments

Index of protein domains and families