P41087 (Y125_RICPR) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 62.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: UPF0176 protein RP125 | ||
| Gene names |
| ||
| Organism | Rickettsia prowazekii (strain Madrid E) | ||
| Taxonomic identifier | 272947 [NCBI] | ||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group |
Protein attributes
| Sequence length | 247 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Sequence similarities | Belongs to the UPF0176 family. Contains 1 rhodanese domain. |
Ontologies
| Keywords | |
|---|---|
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 247 | 247 | UPF0176 protein RP125 HAMAP MF_00469 | PRO_0000161505 | |||||
Regions | |||||||||
| Domain | 124 – 218 | 95 | Rhodanese | ||||||
Sequences
| ||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | Wood D.O. Submitted (OCT-1993) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: Madrid E. |
| [2] | "The genome sequence of Rickettsia prowazekii and the origin of mitochondria." Andersson S.G.E., Zomorodipour A., Andersson J.O., Sicheritz-Ponten T., Alsmark U.C.M., Podowski R.M., Naeslund A.K., Eriksson A.-S., Winkler H.H., Kurland C.G. Nature 396:133-140(1998) [PubMed: 9823893] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Madrid E. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | U02603 Unassigned DNA. Translation: AAA18324.1. AJ235270 Genomic DNA. Translation: CAA14594.1. |
| PIR | C71722. |
| RefSeq | NP_220517.1. NC_000963.1. |
3D structure databases | |
| ProteinModelPortal | P41087. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 883753. |
| GenomeReviews | Gene locus RP125 in contig AJ235269_GR. |
| KEGG | rpr:RP125. |
| PATRIC | 17900990. VBIRicPro72556_0127. |
Phylogenomic databases | |
| HOGENOM | HBG366219. |
| OMA | TETFKQF. |
| ProtClustDB | PRK01415. |
Enzyme and pathway databases | |
| BioCyc | RPRO272947:RP125-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00469. UPF0176. [Tree] |
| InterPro | IPR001763. Rhodanese-like. IPR020936. UPF0176. [Graphical view] |
| Gene3D | G3DSA:3.40.250.10. Rhodanese-like. 1 hit. |
| KO | K07146. |
| Pfam | PF00581. Rhodanese. 1 hit. [Graphical view] |
| SMART | SM00450. RHOD. 1 hit. [Graphical view] |
| SUPFAM | SSF52821. Rhodanese-like. 1 hit. |
| PROSITE | PS50206. RHODANESE_3. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Y125_RICPR | ||||||||
| Accession | Primary (citable) accession number: P41087 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| Uncharacterized protein families (UPF) List of uncharacterized protein family (UPF) entries |
| Rickettsia prowazekii Rickettsia prowazekii (strain Madrid E): entries and gene names |
| SIMILARITY comments Index of protein domains and families |

Clusters with