Reviewed,
UniProtKB/Swiss-Prot P40889 (YJW5_YEAST)
Last modified
October 13, 2009.
Version 61.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin
| Protein names | Recommended name: Y' element ATP-dependent helicase YJL225C EC=3.6.1.- | ||||
| Gene names |
| ||||
| Organism | Saccharomyces cerevisiae (Baker's yeast) [Complete proteome] | ||||
| Taxonomic identifier | 4932 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 1758 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | Catalyzes DNA unwinding and is involved in telomerase-independent telomere maintenance. Ref.3 |
| Induction | Induced in absence of telomerase TLC1. Ref.3 |
| Sequence similarities | Belongs to the helicase family. Yeast subtelomeric Y' repeat subfamily. Contains 1 helicase ATP-binding domain. Contains 1 helicase C-terminal domain. |
Ontologies
| Keywords | |
|---|---|
| Domain | Repeat |
| Ligand | ATP-binding Nucleotide-binding |
| Molecular function | Helicase Hydrolase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Molecular function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent helicase activityInferred from electronic annotation. Source: InterPro nucleic acid bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1758 | 1758 | Y' element ATP-dependent helicase YJL225C | PRO_0000102208 | |||||
Regions | |||||||||
| Domain | 668 – 845 | 178 | Helicase ATP-binding | ||||||
| Domain | 900 – 1051 | 152 | Helicase C-terminal | ||||||
| Nucleotide binding | 681 – 688 | 8 | ATP Potential | ||||||
Sequences
| ||||||||||||||||||
References
Cross-references
Sequence databases | |
|---|---|
| Z48148 Genomic DNA. Translation: CAA88141.1. Sequence problems. Z48148 Genomic DNA. Translation: CAA88142.1. Sequence problems. Z34098 Genomic DNA. Translation: CAA83986.1. Sequence problems. Z34098 Genomic DNA. Translation: CAA83985.1. Sequence problems. Z49498 Genomic DNA. Translation: CAA89520.1. Z49500 Genomic DNA. Translation: CAA89522.1. | |
| PIR | S57015. |
| RefSeq | NP_012311.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1FUK based on UniProtKB P10081. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP:2831N. DIP:4705N. |
| IntAct | P40889. 2 interactions. |
| STRING | P40889. |
Genome annotation databases | |
| Ensembl | YJL225C; YJL225C; YJL225C; Saccharomyces cerevisiae. [Genome view] |
| GeneID | 853231. |
| GenomeReviews | Gene locus YJL225C in contig Y13136_GR. |
| KEGG | sce:YJL225C. |
Organism-specific databases | |
| CYGD | YJL225c. |
| SGD | S000003760. YJL225C. |
Phylogenomic databases | |
| HOGENOM | P40889. |
Gene expression databases | |
| Genevestigator | P40889. |
| GermOnline | YJL225C. Saccharomyces cerevisiae. |
Family and domain databases | |
| InterPro | IPR014001. DEAD-like_N. IPR001650. DNA/RNA_helicase_C. IPR011545. DNA/RNA_helicase_DEAD/DEAH_N. [Graphical view] |
| Pfam | PF00270. DEAD. 1 hit. PF00271. Helicase_C. 1 hit. [Graphical view] |
| SMART | SM00487. DEXDc. 1 hit. SM00490. HELICc. 1 hit. [Graphical view] |
| PROSITE | PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 973446. |
Entry information
| Entry name | YJW5_YEAST | ||||||||
| Accession | Primary (citable) accession number: P40889 Secondary accession number(s): P40887, Q05371, Q9UQW2 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | FPAP (Fungal Proteome Annotation Project) | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| Yeast chromosome X Yeast (Saccharomyces cerevisiae) chromosome X: entries and gene names |

Clusters with


