Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P40629 (413R_IIV6) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative RING finger protein 413R
Gene names
Name:EF2
ORF Names:IIV6-413R
OrganismInvertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus) [Reference proteome]
Taxonomic identifier176652 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
Virus hostAcheta domesticus (House cricket) [TaxID: 6997]
Chilo suppressalis (striped riceborer) [TaxID: 168631]
Gryllus bimaculatus (Two-spotted cricket) [TaxID: 6999]
Gryllus campestris [TaxID: 58607]
Spodoptera frugiperda (Fall armyworm) [TaxID: 7108]

Protein attributes

Sequence length208 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 RING-type zinc finger.

Ontologies

Keywords
   DomainCoiled coil
Zinc-finger
   LigandMetal-binding
Zinc
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular_functionzinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 208208Putative RING finger protein 413R
PRO_0000056410

Regions

Zinc finger148 – 19649RING-type
Coiled coil83 – 14765 Potential
Compositional bias12 – 9483Asp/Glu-rich

Experimental info

Sequence conflict1 – 8383MDAIF…HWSDD → MNIQIQIIMMKDQIVIGLMT in AAK82273. Ref.1

Sequences

Sequence LengthMass (Da)Tools
P40629 [UniParc].

Last modified June 16, 2009. Version 2.
Checksum: B35545675FD6E5FC

FASTA20824,713
        10         20         30         40         50         60 
MDAIFYPLPI GETGDNEKYL EDFQEEDFQE EDFQEEDFQE EDFQEEDEDE EDEEVNEYPS 

        70         80         90        100        110        120 
DLDDEYPDSD YYDERSDRHW SDDDSDRDLD DLYDEYENYY EEVQVKKQNL EVEIIDITPE 

       130        140        150        160        170        180 
IEILNQNEKE KFNQVEDKLT TLSKNLTCII CLTNQVQILT IPCGHLIMCN PCSLNLNNSV 

       190        200 
CTRGVNSNYE KCPKCRTPIY NKIIARLP 

« Hide

References

« Hide 'large scale' references
[1]"Identification of genes encoding zinc finger proteins, non-histone chromosomal HMG protein homologue, and a putative GTP phosphohydrolase in the genome of Chilo iridescent virus."
Schnitzler P., Hug M., Handermann M., Janssen W., Koonin E.V., Delius H., Darai C.
Nucleic Acids Res. 22:158-166(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
Jakob N.J., Mueller K., Bahr U., Darai G.
Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]"Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L22300 Genomic DNA. Translation: AAA17844.1.
AF303741 Genomic DNA. Translation: AAK82273.1.
PIRS77736.
RefSeqNP_149876.1. NC_003038.1.

3D structure databases

ProteinModelPortalP40629.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1732974.

Family and domain databases

Gene3D3.30.40.10. 1 hit.
InterProIPR018957. Znf_C3HC4_RING-type.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamPF00097. zf-C3HC4. 1 hit.
[Graphical view]
SMARTSM00184. RING. 1 hit.
[Graphical view]
PROSITEPS50089. ZF_RING_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry name413R_IIV6
AccessionPrimary (citable) accession number: P40629
Secondary accession number(s): Q91FB2
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: June 16, 2009
Last modified: February 19, 2014
This is version 53 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families