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Protein

Putative uncharacterized protein YIR043C

Gene

YIR043C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YIR043C
Gene namesi
Ordered Locus Names:YIR043C
ORF Names:YI8224.05C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311 Componenti: Chromosome IX

Organism-specific databases

CYGDiYIR043c.
SGDiS000001482. YIR043C.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei93 – 11523HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 230230Putative uncharacterized protein YIR043CPRO_0000207534Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiP40587. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliP40587.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the DUP/COS family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

InParanoidiP40587.
OrthoDBiEOG74TX82.

Family and domain databases

InterProiIPR001142. DUP/COS.
[Graphical view]
PfamiPF00674. DUP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P40587-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGCQEAFRTT LLEPFSLKKD EAAKVKSFKD SVSYIEEALG VYFTEVEKQW
60 70 80 90 100
KLFNTEKSWS PVGLEDAKLP KEAYRFKLTW ILKRIFKLRC LQVFLYYFLI
110 120 130 140 150
VYTSGNVDLI SRFLFPVVMF FIMTRDFQNM GMIVLSVKME HKMQFLSTII
160 170 180 190 200
NEQESGANGW DEIAKKMNRY LFEKKVWNNE EFFYDGLDCE WFFSCFFYRL
210 220 230
LSLKKTMWFA SLNVELWPYV KEAQSVVTSL
Length:230
Mass (Da):27,454
Last modified:August 16, 2005 - v2
Checksum:i038A4DF614E248E6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z46902 Genomic DNA. Translation: CAA87002.1.
BK006942 Genomic DNA. No translation available.
PIRiS50348.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z46902 Genomic DNA. Translation: CAA87002.1.
BK006942 Genomic DNA. No translation available.
PIRiS50348.

3D structure databases

ProteinModelPortaliP40587.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP40587. 1 interaction.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

CYGDiYIR043c.
SGDiS000001482. YIR043C.

Phylogenomic databases

InParanoidiP40587.
OrthoDBiEOG74TX82.

Family and domain databases

InterProiIPR001142. DUP/COS.
[Graphical view]
PfamiPF00674. DUP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.

Entry informationi

Entry nameiYIW3_YEAST
AccessioniPrimary (citable) accession number: P40587
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: August 16, 2005
Last modified: July 22, 2015
This is version 73 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene. This is a truncated version of a DUP/COS protein family member.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome IX
    Yeast (Saccharomyces cerevisiae) chromosome IX: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.