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P40587 (YIW3_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative uncharacterized protein YIR043C
Gene names
Ordered Locus Names:YIR043C
ORF Names:YI8224.05C
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length230 AA.
Sequence statusComplete.
Protein existenceUncertain

General annotation (Comments)

Subcellular location

Membrane; Single-pass membrane protein Potential.

Sequence similarities

Belongs to the DUP/COS family.

Caution

Could be the product of a pseudogene. This is a truncated version of a DUP/COS protein family member.

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 230230Putative uncharacterized protein YIR043C
PRO_0000207534

Regions

Transmembrane93 – 11523Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P40587 [UniParc].

Last modified August 16, 2005. Version 2.
Checksum: 038A4DF614E248E6

FASTA23027,454
        10         20         30         40         50         60 
MGCQEAFRTT LLEPFSLKKD EAAKVKSFKD SVSYIEEALG VYFTEVEKQW KLFNTEKSWS 

        70         80         90        100        110        120 
PVGLEDAKLP KEAYRFKLTW ILKRIFKLRC LQVFLYYFLI VYTSGNVDLI SRFLFPVVMF 

       130        140        150        160        170        180 
FIMTRDFQNM GMIVLSVKME HKMQFLSTII NEQESGANGW DEIAKKMNRY LFEKKVWNNE 

       190        200        210        220        230 
EFFYDGLDCE WFFSCFFYRL LSLKKTMWFA SLNVELWPYV KEAQSVVTSL 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome IX."
Churcher C.M., Bowman S., Badcock K., Bankier A.T., Brown D., Chillingworth T., Connor R., Devlin K., Gentles S., Hamlin N., Harris D.E., Horsnell T., Hunt S., Jagels K., Jones M., Lye G., Moule S., Odell C. expand/collapse author list , Pearson D., Rajandream M.A., Rice P., Rowley N., Skelton J., Smith V., Walsh S.V., Whitehead S., Barrell B.G.
Nature 387:84-87(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z46902 Genomic DNA. Translation: CAA87002.1.
BK006942 Genomic DNA. No translation available.
PIRS50348.

3D structure databases

ProteinModelPortalP40587.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP40587. 1 interaction.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

CYGDYIR043c.
SGDS000001482. YIR043C.

Phylogenomic databases

OrthoDBEOG74TX82.

Gene expression databases

GenevestigatorP40587.

Family and domain databases

InterProIPR001142. DUP.
[Graphical view]
PfamPF00674. DUP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYIW3_YEAST
AccessionPrimary (citable) accession number: P40587
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: August 16, 2005
Last modified: February 19, 2014
This is version 67 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome IX

Yeast (Saccharomyces cerevisiae) chromosome IX: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

SIMILARITY comments

Index of protein domains and families