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P40570

- YIT4_YEAST

UniProt

P40570 - YIT4_YEAST

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Protein

Putative uncharacterized protein YIR014W

Gene

YIR014W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciYEAST:G3O-31435-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YIR014W
Gene namesi
Ordered Locus Names:YIR014W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome IX

Organism-specific databases

CYGDiYIR014w.
SGDiS000001453. YIR014W.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei128 – 14821HelicalSequence AnalysisAdd
BLAST
Transmembranei152 – 17221HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 242242Putative uncharacterized protein YIR014WPRO_0000203004Add
BLAST

Proteomic databases

MaxQBiP40570.

Expressioni

Gene expression databases

GenevestigatoriP40570.

Interactioni

Protein-protein interaction databases

BioGridi35006. 5 interactions.
DIPiDIP-2640N.
IntActiP40570. 3 interactions.
MINTiMINT-425416.
STRINGi4932.YIR014W.

Structurei

3D structure databases

ProteinModelPortaliP40570.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG83059.
InParanoidiP40570.
OMAiETAYCIV.
OrthoDBiEOG7W15H9.

Sequencei

Sequence statusi: Complete.

P40570-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLHLEDDNGR QRSVIANLQK FVYCCLYLRF IKDGSLFLIL LGWIISSLCD
60 70 80 90 100
FIQELTLRYL KKNYLEVGRD NDQEDDESLA IRGLETPIVR MIINKAIRYY
110 120 130 140 150
QGLILLETAY CIVYHIRLDV SRDICSKPYG FVIMLLIREF TCPVPTAFPS
160 170 180 190 200
KLLLVLLDIL LLFCQIVIIN GSLSSSLQNV KLIVKELNAE EEGALNILKL
210 220 230 240
NTWHMDATGP ELIVLKNHDK SIPQQADGDD ATEITPLLNI AE
Length:242
Mass (Da):27,600
Last modified:December 6, 2005 - v2
Checksum:iD81202C770462809
GO

Sequence cautioni

The sequence AAT92745.1 differs from that shown. Reason: Erroneous initiation. Curated
The sequence CAA86084.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z37996 Genomic DNA. Translation: CAA86084.1. Different initiation.
AY692726 Genomic DNA. Translation: AAT92745.1. Different initiation.
BK006942 Genomic DNA. Translation: DAA08560.1.
PIRiS48358.
RefSeqiNP_012279.4. NM_001179536.3.

Genome annotation databases

EnsemblFungiiYIR014W; YIR014W; YIR014W.
GeneIDi854831.
KEGGisce:YIR014W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z37996 Genomic DNA. Translation: CAA86084.1 . Different initiation.
AY692726 Genomic DNA. Translation: AAT92745.1 . Different initiation.
BK006942 Genomic DNA. Translation: DAA08560.1 .
PIRi S48358.
RefSeqi NP_012279.4. NM_001179536.3.

3D structure databases

ProteinModelPortali P40570.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 35006. 5 interactions.
DIPi DIP-2640N.
IntActi P40570. 3 interactions.
MINTi MINT-425416.
STRINGi 4932.YIR014W.

Proteomic databases

MaxQBi P40570.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YIR014W ; YIR014W ; YIR014W .
GeneIDi 854831.
KEGGi sce:YIR014W.

Organism-specific databases

CYGDi YIR014w.
SGDi S000001453. YIR014W.

Phylogenomic databases

eggNOGi NOG83059.
InParanoidi P40570.
OMAi ETAYCIV.
OrthoDBi EOG7W15H9.

Enzyme and pathway databases

BioCyci YEAST:G3O-31435-MONOMER.

Miscellaneous databases

NextBioi 977698.

Gene expression databases

Genevestigatori P40570.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  4. "Sequencing and comparison of yeast species to identify genes and regulatory elements."
    Kellis M., Patterson N., Endrizzi M., Birren B.W., Lander E.S.
    Nature 423:241-254(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION OF PROBABLE INITIATION SITE.

Entry informationi

Entry nameiYIT4_YEAST
AccessioniPrimary (citable) accession number: P40570
Secondary accession number(s): D6VVU4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: December 6, 2005
Last modified: October 29, 2014
This is version 90 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome IX
    Yeast (Saccharomyces cerevisiae) chromosome IX: entries and gene names

External Data

Dasty 3