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P40570 (YIT4_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 87. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative uncharacterized protein YIR014W
Gene names
Ordered Locus Names:YIR014W
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length242 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein Potential.

Sequence caution

The sequence AAT92745.1 differs from that shown. Reason: Erroneous initiation.

The sequence CAA86084.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 242242Putative uncharacterized protein YIR014W
PRO_0000203004

Regions

Transmembrane128 – 14821Helical; Potential
Transmembrane152 – 17221Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P40570 [UniParc].

Last modified December 6, 2005. Version 2.
Checksum: D81202C770462809

FASTA24227,600
        10         20         30         40         50         60 
MLHLEDDNGR QRSVIANLQK FVYCCLYLRF IKDGSLFLIL LGWIISSLCD FIQELTLRYL 

        70         80         90        100        110        120 
KKNYLEVGRD NDQEDDESLA IRGLETPIVR MIINKAIRYY QGLILLETAY CIVYHIRLDV 

       130        140        150        160        170        180 
SRDICSKPYG FVIMLLIREF TCPVPTAFPS KLLLVLLDIL LLFCQIVIIN GSLSSSLQNV 

       190        200        210        220        230        240 
KLIVKELNAE EEGALNILKL NTWHMDATGP ELIVLKNHDK SIPQQADGDD ATEITPLLNI 


AE 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome IX."
Churcher C.M., Bowman S., Badcock K., Bankier A.T., Brown D., Chillingworth T., Connor R., Devlin K., Gentles S., Hamlin N., Harris D.E., Horsnell T., Hunt S., Jagels K., Jones M., Lye G., Moule S., Odell C. expand/collapse author list , Pearson D., Rajandream M.A., Rice P., Rowley N., Skelton J., Smith V., Walsh S.V., Whitehead S., Barrell B.G.
Nature 387:84-87(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae."
Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. expand/collapse author list , Simpson A.J.G., Bulyk M.L., Harlow E., Marsischky G., Kolodner R.D., LaBaer J.
Genome Res. 17:536-543(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[4]"Sequencing and comparison of yeast species to identify genes and regulatory elements."
Kellis M., Patterson N., Endrizzi M., Birren B.W., Lander E.S.
Nature 423:241-254(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION OF PROBABLE INITIATION SITE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z37996 Genomic DNA. Translation: CAA86084.1. Different initiation.
AY692726 Genomic DNA. Translation: AAT92745.1. Different initiation.
BK006942 Genomic DNA. Translation: DAA08560.1.
PIRS48358.
RefSeqNP_012279.4. NM_001179536.3.

3D structure databases

ProteinModelPortalP40570.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid35006. 5 interactions.
DIPDIP-2640N.
IntActP40570. 3 interactions.
MINTMINT-425416.
STRING4932.YIR014W.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYIR014W; YIR014W; YIR014W.
GeneID854831.
KEGGsce:YIR014W.

Organism-specific databases

CYGDYIR014w.
SGDS000001453. YIR014W.

Phylogenomic databases

eggNOGNOG83059.
OMAVINIERD.
OrthoDBEOG7W15H9.

Enzyme and pathway databases

BioCycYEAST:G3O-31435-MONOMER.

Gene expression databases

GenevestigatorP40570.

Family and domain databases

ProtoNetSearch...

Other

NextBio977698.

Entry information

Entry nameYIT4_YEAST
AccessionPrimary (citable) accession number: P40570
Secondary accession number(s): D6VVU4
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: December 6, 2005
Last modified: February 19, 2014
This is version 87 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome IX

Yeast (Saccharomyces cerevisiae) chromosome IX: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD