Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P40525

- RL34B_YEAST

UniProt

P40525 - RL34B_YEAST

Protein

60S ribosomal protein L34-B

Gene

RPL34B

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: SGD

    GO - Biological processi

    1. cytoplasmic translation Source: SGD

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciYEAST:G3O-31323-MONOMER.
    ReactomeiREACT_188965. SRP-dependent cotranslational protein targeting to membrane.
    REACT_189050. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
    REACT_189183. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
    REACT_217188. Formation of a pool of free 40S subunits.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    60S ribosomal protein L34-B
    Gene namesi
    Name:RPL34B
    Ordered Locus Names:YIL052C
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome IX

    Organism-specific databases

    CYGDiYIL052c.
    SGDiS000001314. RPL34B.

    Subcellular locationi

    Cytoplasm 1 Publication

    GO - Cellular componenti

    1. cytosolic large ribosomal subunit Source: SGD

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 12112160S ribosomal protein L34-BPRO_0000131846Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriP40525.

    Interactioni

    Subunit structurei

    Component of the large ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains 32 different proteins (encoded by 56 genes) and 1 molecule of RNA (18S). The 60S subunit contains 46 different proteins (encoded by 81 genes) and 3 molecules of RNA (25S, 5.8S and 5S).1 Publication

    Protein-protein interaction databases

    BioGridi34938. 36 interactions.
    DIPiDIP-5499N.
    IntActiP40525. 6 interactions.
    MINTiMINT-8285621.
    STRINGi4932.YIL052C.

    Structurei

    3D structure databases

    ProteinModelPortaliP40525.
    SMRiP40525. Positions 2-113.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L34e family.Curated

    Phylogenomic databases

    GeneTreeiENSGT00390000008294.
    HOGENOMiHOG000216922.
    KOiK02915.
    OMAiRCGDCVK.
    OrthoDBiEOG76TB4F.

    Family and domain databases

    InterProiIPR008195. Ribosomal_L34Ae.
    IPR018065. Ribosomal_L34e_CS.
    [Graphical view]
    PANTHERiPTHR10759. PTHR10759. 1 hit.
    PfamiPF01199. Ribosomal_L34e. 1 hit.
    [Graphical view]
    PRINTSiPR01250. RIBOSOMALL34.
    PROSITEiPS01145. RIBOSOMAL_L34E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P40525-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAQRVTFRRR NPYNTRSNKI KVVKTPGGIL RAQHVKKLAT RPKCGDCGSA    50
    LQGISTLRPR QYATVSKTHK TVSRAYGGSR CANCVKERIV RAFLIEEQKI 100
    VKKVVKEQTE AAKKSEKKSK K 121
    Length:121
    Mass (Da):13,641
    Last modified:February 1, 1995 - v1
    Checksum:i6B0AD076CD85ACF4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z38060 Genomic DNA. Translation: CAA86170.1.
    BK006942 Genomic DNA. Translation: DAA08495.1.
    PIRiS48427.
    RefSeqiNP_012212.1. NM_001179402.1.

    Genome annotation databases

    EnsemblFungiiYIL052C; YIL052C; YIL052C.
    GeneIDi854759.
    KEGGisce:YIL052C.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z38060 Genomic DNA. Translation: CAA86170.1 .
    BK006942 Genomic DNA. Translation: DAA08495.1 .
    PIRi S48427.
    RefSeqi NP_012212.1. NM_001179402.1.

    3D structure databases

    ProteinModelPortali P40525.
    SMRi P40525. Positions 2-113.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 34938. 36 interactions.
    DIPi DIP-5499N.
    IntActi P40525. 6 interactions.
    MINTi MINT-8285621.
    STRINGi 4932.YIL052C.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YIL052C ; YIL052C ; YIL052C .
    GeneIDi 854759.
    KEGGi sce:YIL052C.

    Organism-specific databases

    CYGDi YIL052c.
    SGDi S000001314. RPL34B.

    Phylogenomic databases

    GeneTreei ENSGT00390000008294.
    HOGENOMi HOG000216922.
    KOi K02915.
    OMAi RCGDCVK.
    OrthoDBi EOG76TB4F.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-31323-MONOMER.
    Reactomei REACT_188965. SRP-dependent cotranslational protein targeting to membrane.
    REACT_189050. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
    REACT_189183. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
    REACT_217188. Formation of a pool of free 40S subunits.

    Miscellaneous databases

    NextBioi 977499.

    Gene expression databases

    Genevestigatori P40525.

    Family and domain databases

    InterProi IPR008195. Ribosomal_L34Ae.
    IPR018065. Ribosomal_L34e_CS.
    [Graphical view ]
    PANTHERi PTHR10759. PTHR10759. 1 hit.
    Pfami PF01199. Ribosomal_L34e. 1 hit.
    [Graphical view ]
    PRINTSi PR01250. RIBOSOMALL34.
    PROSITEi PS01145. RIBOSOMAL_L34E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    2. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    3. "The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae."
      Planta R.J., Mager W.H.
      Yeast 14:471-477(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NOMENCLATURE, SUBUNIT.
    4. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
    5. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiRL34B_YEAST
    AccessioniPrimary (citable) accession number: P40525
    Secondary accession number(s): D6VVM9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: February 1, 1995
    Last modified: October 1, 2014
    This is version 104 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 21000 molecules/cell in log phase SD medium.1 Publication
    There are 2 genes for L34 in yeast.

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families
    3. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    4. Yeast chromosome IX
      Yeast (Saccharomyces cerevisiae) chromosome IX: entries and gene names

    External Data

    Dasty 3