P40525 (RL34B_YEAST) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
60S ribosomal protein L34-B

Gene names

Name:	RPL34B
Ordered Locus Names:	YIL052C

Organism

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]

Taxonomic identifier

559292 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces › Saccharomyces cerevisiae

Protein attributes

Sequence length	121 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Subunit structure	Component of the large ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains 32 different proteins (encoded by 56 genes) and 1 molecule of RNA (18S). The 60S subunit contains 46 different proteins (encoded by 81 genes) and 3 molecules of RNA (25S, 5.8S and 5S). Ref.3
Subcellular location	Cytoplasm Ref.4.
Miscellaneous	Present with 21000 molecules/cell in log phase SD medium. There are 2 genes for L34 in yeast.
Sequence similarities	Belongs to the ribosomal protein L34e family.

Ontologies

Keywords
Cellular component	Cytoplasm
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	cytoplasmic translation Traceable author statement Ref.3. Source: SGD
Cellular_component	cytosolic large ribosomal subunit Traceable author statement Ref.3. Source: SGD
Molecular_function	structural constituent of ribosome Traceable author statement Ref.3. Source: SGD
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 121	121	60S ribosomal protein L34-B		PRO_0000131846

Sequences

	Sequence		Length	Mass (Da)
	P40525 [UniParc]. Last modified February 1, 1995. Version 1. Checksum: 6B0AD076CD85ACF4	FASTA	121	13,641
	10 20 30 40 50 60 MAQRVTFRRR NPYNTRSNKI KVVKTPGGIL RAQHVKKLAT RPKCGDCGSA LQGISTLRPR 70 80 90 100 110 120 QYATVSKTHK TVSRAYGGSR CANCVKERIV RAFLIEEQKI VKKVVKEQTE AAKKSEKKSK K

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The nucleotide sequence of Saccharomyces cerevisiae chromosome IX." Churcher C.M., Bowman S., Badcock K., Bankier A.T., Brown D., Chillingworth T., Connor R., Devlin K., Gentles S., Hamlin N., Harris D.E., Horsnell T., Hunt S., Jagels K., Jones M., Lye G., Moule S., Odell C. , Pearson D., Rajandream M.A., Rice P., Rowley N., Skelton J., Smith V., Walsh S.V., Whitehead S., Barrell B.G. Nature 387:84-87(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204511 / S288c / AB972.
[2]	Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c.
[3]	"The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae." Planta R.J., Mager W.H. Yeast 14:471-477(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NOMENCLATURE, SUBUNIT.
[4]	"Global analysis of protein localization in budding yeast." Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K. Nature 425:686-691(2003) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
[5]	"Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z38060 Genomic DNA. Translation: CAA86170.1. BK006942 Genomic DNA. Translation: DAA08495.1.
PIR	S48427.
RefSeq	NP_012212.1. NM_001179402.1.
3D structure databases
ProteinModelPortal	P40525.
SMR	P40525. Positions 2-113.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-5499N.
IntAct	P40525. 3 interactions.
MINT	MINT-8285621.
STRING	4932.YIL052C.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblFungi	YIL052C; YIL052C; YIL052C.
GeneID	854759.
KEGG	sce:YIL052C.
Organism-specific databases
CYGD	YIL052c.
SGD	S000001314. RPL34B.
Phylogenomic databases
GeneTree	ENSGT00390000008294.
HOGENOM	HOG000216922.
KO	K02915.
OMA	KKTVQRA.
OrthoDB	EOG4QG0PT.
Enzyme and pathway databases
BioCyc	YEAST:G3O-31323-MONOMER.
Gene expression databases
Genevestigator	P40525.
GermOnline	YIL052C. Saccharomyces cerevisiae.
Family and domain databases
InterPro	IPR008195. Ribosomal_L34Ae. IPR018065. Ribosomal_L34e_CS. [Graphical view]
PANTHER	PTHR10759. PTHR10759. 1 hit.
Pfam	PF01199. Ribosomal_L34e. 1 hit. [Graphical view]
PRINTS	PR01250. RIBOSOMALL34.
PROSITE	PS01145. RIBOSOMAL_L34E. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	977499.

Entry information

Entry name

RL34B_YEAST

Accession

Primary (citable) accession number: P40525
Secondary accession number(s): D6VVM9

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 1, 1995
Last sequence update:	February 1, 1995
Last modified:	May 29, 2013
This is version 96 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Fungal Protein Annotation Program