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P40524

- YIF4_YEAST

UniProt

P40524 - YIF4_YEAST

Protein

Uncharacterized membrane protein YIL054W

Gene

YIL054W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Enzyme and pathway databases

    BioCyciYEAST:G3O-31324-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized membrane protein YIL054W
    Gene namesi
    Ordered Locus Names:YIL054W
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome IX

    Organism-specific databases

    CYGDiYIL054w.
    SGDiS000001316. YIL054W.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 105105Uncharacterized membrane protein YIL054WPRO_0000202990Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriP40524.

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-5647N.
    MINTiMINT-530230.
    STRINGi4932.YIL054W.

    Structurei

    3D structure databases

    ProteinModelPortaliP40524.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 4848ExtracellularSequence AnalysisAdd
    BLAST
    Topological domaini70 – 701CytoplasmicSequence Analysis
    Topological domaini92 – 10514ExtracellularSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei49 – 6921HelicalSequence AnalysisAdd
    BLAST
    Transmembranei71 – 9121HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    OrthoDBiEOG7XDBV7.

    Sequencei

    Sequence statusi: Complete.

    P40524-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAPKAFFVCL PWVLPRHALI VRQAGNPYHF LAYTNPRAPG KLQDSHCPVF    50
    FMGIIIITII TVTLAIIIIN IIFLTLFDDG MCFYCSLLTF SFVSFNFDHF 100
    DHFDL 105
    Length:105
    Mass (Da):12,045
    Last modified:February 1, 1995 - v1
    Checksum:i7FBB73A4613CA181
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z38060 Genomic DNA. Translation: CAA86168.1.
    AY558302 Genomic DNA. Translation: AAS56628.1.
    BK006942 Genomic DNA. Translation: DAA35118.1.
    PIRiS48425.
    RefSeqiNP_001257680.1. NM_001270751.1.

    Genome annotation databases

    EnsemblFungiiYIL054W; YIL054W; YIL054W.
    GeneIDi854757.
    KEGGisce:YIL054W.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z38060 Genomic DNA. Translation: CAA86168.1 .
    AY558302 Genomic DNA. Translation: AAS56628.1 .
    BK006942 Genomic DNA. Translation: DAA35118.1 .
    PIRi S48425.
    RefSeqi NP_001257680.1. NM_001270751.1.

    3D structure databases

    ProteinModelPortali P40524.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-5647N.
    MINTi MINT-530230.
    STRINGi 4932.YIL054W.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YIL054W ; YIL054W ; YIL054W .
    GeneIDi 854757.
    KEGGi sce:YIL054W.

    Organism-specific databases

    CYGDi YIL054w.
    SGDi S000001316. YIL054W.

    Phylogenomic databases

    OrthoDBi EOG7XDBV7.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-31324-MONOMER.

    Gene expression databases

    Genevestigatori P40524.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    2. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    4. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
    5. "A global topology map of the Saccharomyces cerevisiae membrane proteome."
      Kim H., Melen K., Oesterberg M., von Heijne G.
      Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
      Strain: ATCC 208353 / W303-1A.

    Entry informationi

    Entry nameiYIF4_YEAST
    AccessioniPrimary (citable) accession number: P40524
    Secondary accession number(s): I2HB64
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: February 1, 1995
    Last modified: October 1, 2014
    This is version 78 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 521 molecules/cell in log phase SD medium.1 Publication

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    2. Yeast chromosome IX
      Yeast (Saccharomyces cerevisiae) chromosome IX: entries and gene names

    External Data

    Dasty 3