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P40449 (YIQ1_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 78. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YIL161W
Gene names
Ordered Locus Names:YIL161W
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length235 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Miscellaneous

Present with 1230 molecules/cell in log phase SD medium.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 235235Uncharacterized protein YIL161W
PRO_0000202952

Sequences

Sequence LengthMass (Da)Tools
P40449 [UniParc].

Last modified February 1, 1995. Version 1.
Checksum: D4E54F665383EA07

FASTA23527,112
        10         20         30         40         50         60 
MDTKLSVTGA KKSQGKASGL GNEGTPIGNE ESTNKAKNGN KKRNKNRNRN KKTETKEQNE 

        70         80         90        100        110        120 
PKPVTGGEEV RVEKSQAKNR RRKNNNGANK KNTLHYSKEI NVEERKQIAK RQEEIEQCIH 

       130        140        150        160        170        180 
TLSDFKLFKK GKHVTSYGYR ISPMTDSGKI SLKILFNIPL DYPKAPIKLT MKSNEEVSSY 

       190        200        210        220        230 
MDTVIANFNW KARQLVKEDW RILSQINYLV SELEILKMEN YKQIDKLRNS FYKTI 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome IX."
Churcher C.M., Bowman S., Badcock K., Bankier A.T., Brown D., Chillingworth T., Connor R., Devlin K., Gentles S., Hamlin N., Harris D.E., Horsnell T., Hunt S., Jagels K., Jones M., Lye G., Moule S., Odell C. expand/collapse author list , Pearson D., Rajandream M.A., Rice P., Rowley N., Skelton J., Smith V., Walsh S.V., Whitehead S., Barrell B.G.
Nature 387:84-87(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]"The reference genome sequence of Saccharomyces cerevisiae: Then and now."
Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R., Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S., Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.
G3 (Bethesda) 4:389-398(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
[4]"Sites of ubiquitin attachment in Saccharomyces cerevisiae."
Starita L.M., Lo R.S., Eng J.K., von Haller P.D., Fields S.
Proteomics 12:236-240(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z38059 Genomic DNA. Translation: CAA86117.1.
BK006942 Genomic DNA. Translation: DAA08391.1.
PIRS48373.
RefSeqNP_012105.1. NM_001179509.1.

3D structure databases

ProteinModelPortalP40449.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid34831. 28 interactions.
IntActP40449. 25 interactions.
MINTMINT-2492066.
STRING4932.YIL161W.

Proteomic databases

MaxQBP40449.
PaxDbP40449.
PeptideAtlasP40449.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYIL161W; YIL161W; YIL161W.
GeneID854645.
KEGGsce:YIL161W.

Organism-specific databases

CYGDYIL161w.
SGDS000001423. YIL161W.

Phylogenomic databases

eggNOGNOG81320.
OMAHYSKEIN.
OrthoDBEOG7G4QS6.

Enzyme and pathway databases

BioCycYEAST:G3O-31408-MONOMER.

Gene expression databases

GenevestigatorP40449.

Family and domain databases

ProtoNetSearch...

Other

NextBio977184.

Entry information

Entry nameYIQ1_YEAST
AccessionPrimary (citable) accession number: P40449
Secondary accession number(s): D6VVC5
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: May 14, 2014
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome IX

Yeast (Saccharomyces cerevisiae) chromosome IX: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD