P40343 (VPS27_YEAST) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 128.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Vacuolar protein sorting-associated protein 27 Alternative name(s): Golgi retention defective protein 11 | ||||||||
| Gene names |
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| Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome] | ||||||||
| Taxonomic identifier | 559292 [NCBI] | ||||||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces › ![]() |
Protein attributes
| Sequence length | 622 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. Controls exit from the prevacuolar compartment (PVC) in both the forward direction to the vacuole and the return to the Golgi. Allows VPS10 to return to the (trans-Golgi network) TGN from the PVC. Might also function as an alternate adapter in the COPIb clathrin-like coat. Ref.5 Ref.6 Ref.7 Ref.8 Ref.9 Ref.11 Ref.12 Ref.15 Ref.16 Ref.17 Ref.18 Ref.22 Ref.23 Ref.25 Ref.28 Ref.30 |
| Subunit structure | Component of the ESCRT-0 complex composed of HSE1 and VPS27. Interacts with ENT3 and ENT5, the ESCRT-I subunits VPS23 and VPS28 and with the COPIb subunits SEC27, SEC28 and SEC33. Ref.14 Ref.15 Ref.17 Ref.18 Ref.23 Ref.25 Ref.28 Ref.35 |
| Subcellular location | Endosome membrane; Peripheral membrane protein; Cytoplasmic side Ref.13 Ref.17 Ref.20 Ref.24 Ref.28 Ref.29. |
| Domain | The FYVE domain is involved in the binding to phosphatidylinositol 3-phosphate (PtdIns3P) which is required for the association to endosomal membranes. Ref.10 Ref.13 Ref.14 Ref.19 Both IUM domains are necessary for efficient binding to ubiquitin. Ref.10 Ref.13 Ref.14 Ref.19 |
| Miscellaneous | Present with 172 molecules/cell in log phase SD medium. |
| Sequence similarities | Belongs to the VPS27 family. Contains 1 FYVE-type zinc finger. Contains 2 UIM (ubiquitin-interacting motif) repeats. Contains 1 VHS domain. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Endosome Membrane |
| Domain | Repeat Zinc-finger |
| Ligand | Metal-binding Zinc |
| PTM | Phosphoprotein |
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | late endosome to vacuole transport Inferred from mutant phenotype Ref.15. Source: SGD protein retention in Golgi apparatusInferred from mutant phenotype Ref.7. Source: SGD protein targeting to vacuoleInferred from mutant phenotype Ref.15. Source: SGD |
| Cellular_component | ESCRT-0 complex Inferred from physical interaction Ref.15. Source: SGD endosome membraneInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW phosphatidylinositol-3-phosphate bindingInferred from direct assay Ref.10. Source: SGD ubiquitin bindingInferred from direct assay Ref.15PubMed 20150893. Source: SGD |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| HSE1 | P38753 | 10 | EBI-20380,EBI-1382 | |
| SEC28 | P40509 | 2 | EBI-20380,EBI-4884 |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 622 | 622 | Vacuolar protein sorting-associated protein 27 | PRO_0000065893 | ||||||||||||||||||||||||||||||||
Regions | ||||||||||||||||||||||||||||||||||||
| Domain | 18 – 149 | 132 | VHS | |||||||||||||||||||||||||||||||||
| Repeat | 258 – 277 | 20 | UIM 1 | |||||||||||||||||||||||||||||||||
| Repeat | 301 – 320 | 20 | UIM 2 | |||||||||||||||||||||||||||||||||
| Zinc finger | 170 – 230 | 61 | FYVE-type | |||||||||||||||||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||||||||||||||||
| Modified residue | 155 | 1 | Phosphoserine Ref.32 | |||||||||||||||||||||||||||||||||
| Modified residue | 157 | 1 | Phosphoserine Ref.26 Ref.27 Ref.32 | |||||||||||||||||||||||||||||||||
| Modified residue | 274 | 1 | Phosphoserine Ref.32 | |||||||||||||||||||||||||||||||||
| Modified residue | 279 | 1 | Phosphoserine Ref.32 | |||||||||||||||||||||||||||||||||
| Modified residue | 280 | 1 | Phosphoserine Ref.32 | |||||||||||||||||||||||||||||||||
| Modified residue | 495 | 1 | Phosphoserine Ref.26 Ref.27 Ref.31 Ref.32 | |||||||||||||||||||||||||||||||||
| Modified residue | 497 | 1 | Phosphothreonine Ref.32 | |||||||||||||||||||||||||||||||||
| Modified residue | 613 | 1 | Phosphoserine Ref.32 | |||||||||||||||||||||||||||||||||
Experimental info | ||||||||||||||||||||||||||||||||||||
| Mutagenesis | 185 – 186 | 2 | LL → AA: Decreases the association to PtdIns(3)P containing membranes. | |||||||||||||||||||||||||||||||||
| Mutagenesis | 193 | 1 | R → A: Decreases the association to PtdIns(3)P containing membranes. Ref.13 | |||||||||||||||||||||||||||||||||
| Mutagenesis | 270 | 1 | S → D: Reduces strongly the ubiquitin-binding activity. Ref.14 | |||||||||||||||||||||||||||||||||
| Mutagenesis | 313 | 1 | S → D: Reduces strongly the ubiquitin-binding activity. Ref.14 | |||||||||||||||||||||||||||||||||
| Sequence conflict | 321 – 322 | 2 | KL → NV in AAA96002. Ref.1 | |||||||||||||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||||||||||||
| Turn | 177 – 179 | 3 | ||||||||||||||||||||||||||||||||||
| Turn | 193 – 195 | 3 | ||||||||||||||||||||||||||||||||||
| Helix | 201 – 203 | 3 | ||||||||||||||||||||||||||||||||||
| Beta strand | 206 – 210 | 5 | ||||||||||||||||||||||||||||||||||
| Helix | 211 – 213 | 3 | ||||||||||||||||||||||||||||||||||
| Beta strand | 215 – 221 | 7 | ||||||||||||||||||||||||||||||||||
| Helix | 223 – 229 | 7 | ||||||||||||||||||||||||||||||||||
| Beta strand | 251 – 253 | 3 | ||||||||||||||||||||||||||||||||||
| Helix | 259 – 272 | 14 | ||||||||||||||||||||||||||||||||||
| Helix | 274 – 276 | 3 | ||||||||||||||||||||||||||||||||||
| Helix | 304 – 318 | 15 | ||||||||||||||||||||||||||||||||||
| Helix | 352 – 369 | 18 | ||||||||||||||||||||||||||||||||||
| Turn | 375 – 379 | 5 | ||||||||||||||||||||||||||||||||||
| Helix | 381 – 436 | 56 | ||||||||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "VPS27 controls vacuolar and endocytic traffic through a prevacuolar compartment in Saccharomyces cerevisiae." Piper R.C., Cooper A.A., Yang H., Stevens T.H. J. Cell Biol. 131:603-617(1995) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "Twelve open reading frames revealed in the 23.6 kb segment flanking the centromere on the Saccharomyces cerevisiae chromosome XIV right arm." Verhasselt P., Aert R., Voet M., Volckaert G. Yeast 10:1355-1361(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 96604 / S288c / FY1679. |
| [3] | "The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications." Philippsen P., Kleine K., Poehlmann R., Duesterhoeft A., Hamberg K., Hegemann J.H., Obermaier B., Urrestarazu L.A., Aert R., Albermann K., Altmann R., Andre B., Baladron V., Ballesta J.P.G., Becam A.-M., Beinhauer J.D., Boskovic J., Buitrago M.J. Hani J.Nature 387:93-98(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 96604 / S288c / FY1679. |
| [4] | Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c. |
| [5] | "Protein sorting in Saccharomyces cerevisiae: isolation of mutants defective in the delivery and processing of multiple vacuolar hydrolases." Robinson J.S., Klionsky D.J., Banta L.M., Emr S.D. Mol. Cell. Biol. 8:4936-4948(1988) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [6] | "Morphological classification of the yeast vacuolar protein sorting mutants: evidence for a prevacuolar compartment in class E vps mutants." Raymond C.K., Howald-Stevenson I., Vater C.A., Stevens T.H. Mol. Biol. Cell 3:1389-1402(1992) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [7] | "The newly identified yeast GRD genes are required for retention of late-Golgi membrane proteins." Nothwehr S.F., Bryant N.J., Stevens T.H. Mol. Cell. Biol. 16:2700-2707(1996) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [8] | "Two separate signals act independently to localize a yeast late Golgi membrane protein through a combination of retrieval and retention." Bryant N.J., Stevens T.H. J. Cell Biol. 136:287-297(1997) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [9] | "Novel genes involved in endosomal traffic in yeast revealed by suppression of a targeting-defective plasma membrane ATPase mutant." Luo W.-J., Chang A. J. Cell Biol. 138:731-746(1997) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [10] | "Phosphatidylinositol(3)-phosphate signaling mediated by specific binding to RING FYVE domains." Burd C.G., Emr S.D. Mol. Cell 2:157-162(1998) [PubMed] [Europe PMC] [Abstract] Cited for: DOMAIN, PHOSPHATIDYLINOSITOL 3-PHOSPHATE BINDING. |
| [11] | "Pep12p is a multifunctional yeast syntaxin that controls entry of biosynthetic, endocytic and retrograde traffic into the prevacuolar compartment." Gerrard S.R., Levi B.P., Stevens T.H. Traffic 1:259-269(2000) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [12] | "Deubiquitination step in the endocytic pathway of yeast plasma membrane proteins: crucial role of Doa4p ubiquitin isopeptidase." Dupre S., Haguenauer-Tsapis R. Mol. Cell. Biol. 21:4482-4494(2001) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [13] | "Phosphatidylinositol 3-phosphate induces the membrane penetration of the FYVE domains of Vps27p and Hrs." Stahelin R.V., Long F., Diraviyam K., Bruzik K.S., Murray D., Cho W. J. Biol. Chem. 277:26379-26388(2002) [PubMed] [Europe PMC] [Abstract] Cited for: DOMAIN, SUBCELLULAR LOCATION, MUTAGENESIS OF 185-LEU-LEU-186 AND ARG-193. |
| [14] | "Epsins and Vps27p/Hrs contain ubiquitin-binding domains that function in receptor endocytosis." Shih S.C., Katzmann D.J., Schnell J.D., Sutanto M., Emr S.D., Hicke L. Nat. Cell Biol. 4:389-393(2002) [PubMed] [Europe PMC] [Abstract] Cited for: DOMAINS, INTERACTION WITH UBIQUITIN, MUTAGENESIS OF SER-270 AND SER-313. |
| [15] | "The Vps27p-Hse1p complex binds ubiquitin and mediates endosomal protein sorting." Bilodeau P.S., Urbanowski J.L., Winistorfer S.C., Piper R.C. Nat. Cell Biol. 4:534-539(2002) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION IN THE ESCRT-0 COMPLEX, FUNCTION OF THE ESCRT-0 COMPLEX. |
| [16] | "Ordering of compartments in the yeast endocytic pathway." Prescianotto-Baschong C., Riezman H. Traffic 3:37-49(2002) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [17] | "Vps27 recruits ESCRT machinery to endosomes during MVB sorting." Katzmann D.J., Stefan C.J., Babst M., Emr S.D. J. Cell Biol. 162:413-423(2003) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH VPS23 AND VPS28. |
| [18] | "Vps27-Hse1 and ESCRT-I complexes cooperate to increase efficiency of sorting ubiquitinated proteins at the endosome." Bilodeau P.S., Winistorfer S.C., Kearney W.R., Robertson A.D., Piper R.C. J. Cell Biol. 163:237-243(2003) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION OF THE ESCRT-0 COMPLEX, INTERACTION WITH UBIQUITIN. |
| [19] | "Computer modeling of the membrane interaction of FYVE domains." Diraviyam K., Stahelin R.V., Cho W., Murray D. J. Mol. Biol. 328:721-736(2003) [PubMed] [Europe PMC] [Abstract] Cited for: DOMAIN. |
| [20] | "Global analysis of protein localization in budding yeast." Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K. Nature 425:686-691(2003) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS]. |
| [21] | "Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS]. |
| [22] | "Yeast Mn2+ transporter, Smf1p, is regulated by ubiquitin-dependent vacuolar protein sorting." Eguez L., Chung Y.-S., Kuchibhatla A., Paidhungat M., Garrett S. Genetics 167:107-117(2004) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [23] | "Ent5p is required with Ent3p and Vps27p for ubiquitin-dependent protein sorting into the multivesicular body." Eugster A., Pecheur E.-I., Michel F., Winsor B., Letourneur F., Friant S. Mol. Biol. Cell 15:3031-3041(2004) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH ENT3 AND ENT5. |
| [24] | "Essential role for the myotubularin-related phosphatase Ymr1p and the synaptojanin-like phosphatases Sjl2p and Sjl3p in regulation of phosphatidylinositol 3-phosphate in yeast." Parrish W.R., Stefan C.J., Emr S.D. Mol. Biol. Cell 15:3567-3579(2004) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [25] | "Protein-protein interactions of ESCRT complexes in the yeast Saccharomyces cerevisiae." Bowers K., Lottridge J., Helliwell S.B., Goldthwaite L.M., Luzio J.P., Stevens T.H. Traffic 5:194-210(2004) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH HSE1 AND VPS23, FUNCTION OF THE ESCRT-0 COMPLEX. |
| [26] | "Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway." Gruhler A., Olsen J.V., Mohammed S., Mortensen P., Faergeman N.J., Mann M., Jensen O.N. Mol. Cell. Proteomics 4:310-327(2005) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-157 AND SER-495, MASS SPECTROMETRY. Strain: YAL6B. |
| [27] | "Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae." Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J., Elias J.E., Gygi S.P. J. Proteome Res. 6:1190-1197(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-157 AND SER-495, MASS SPECTROMETRY. Strain: ADR376. |
| [28] | "Involvement of specific COPI subunits in protein sorting from the late endosome to the vacuole in yeast." Gabriely G., Kama R., Gerst J.E. Mol. Cell. Biol. 27:526-540(2007) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH SEC27; SEC28 AND SEC33. |
| [29] | "Btn2, a Hook1 ortholog and potential Batten disease-related protein, mediates late endosome-Golgi protein sorting in yeast." Kama R., Robinson M., Gerst J.E. Mol. Cell. Biol. 27:605-621(2007) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [30] | "Efficient cargo sorting by ESCRT-I and the subsequent release of ESCRT-I from multivesicular bodies requires the subunit Mvb12." Curtiss M., Jones C., Babst M. Mol. Biol. Cell 18:636-645(2007) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [31] | "Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases." Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H. Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-495, MASS SPECTROMETRY. |
| [32] | "A multidimensional chromatography technology for in-depth phosphoproteome analysis." Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H. Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-155; SER-157; SER-274; SER-279; SER-280; SER-495; THR-497 AND SER-613, MASS SPECTROMETRY. |
| [33] | "Crystal structure of a phosphatidylinositol 3-phosphate-specific membrane-targeting motif, the FYVE domain of Vps27p." Misra S., Hurley J.H. Cell 97:657-666(1999) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.15 ANGSTROMS) OF 163-230. |
| [34] | "Solution structure of Vps27 UIM-ubiquitin complex important for endosomal sorting and receptor downregulation." Swanson K.A., Kang R.S., Stamenova S.D., Hicke L., Radhakrishnan I. EMBO J. 22:4597-4606(2003) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY NMR OF 250-329. |
| [35] | "Structure and ubiquitin binding of the ubiquitin-interacting motif." Fisher R.D., Wang B., Alam S.L., Higginson D.S., Robinson H., Sundquist W.I., Hill C.P. J. Biol. Chem. 278:28976-28984(2003) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.45 ANGSTROMS) OF 301-320, INTERACTION WITH UBIQUITIN. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | U24218 Genomic DNA. Translation: AAA96002.1. X77395 Genomic DNA. Translation: CAA54574.1. Z71620 Genomic DNA. Translation: CAA96282.1. BK006947 Genomic DNA. Translation: DAA10547.1. | ||||||||||||||||||||||||||||||||||||||||||||||||
| PIR | S45129. | ||||||||||||||||||||||||||||||||||||||||||||||||
| RefSeq | NP_014403.3. NM_001183183.3. | ||||||||||||||||||||||||||||||||||||||||||||||||
3D structure databases | |||||||||||||||||||||||||||||||||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | P40343. | ||||||||||||||||||||||||||||||||||||||||||||||||
| SMR | P40343. Positions 1-231, 250-329, 348-438. | ||||||||||||||||||||||||||||||||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||||||||||||||||||||||||||||||||
| DIP | DIP-1741N. | ||||||||||||||||||||||||||||||||||||||||||||||||
| IntAct | P40343. 5 interactions. | ||||||||||||||||||||||||||||||||||||||||||||||||
| MINT | MINT-386565. | ||||||||||||||||||||||||||||||||||||||||||||||||
| STRING | 4932.YNR006W. | ||||||||||||||||||||||||||||||||||||||||||||||||
Proteomic databases | |||||||||||||||||||||||||||||||||||||||||||||||||
| PaxDb | P40343. | ||||||||||||||||||||||||||||||||||||||||||||||||
| PeptideAtlas | P40343. | ||||||||||||||||||||||||||||||||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||||||||||||||||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||
Genome annotation databases | |||||||||||||||||||||||||||||||||||||||||||||||||
| EnsemblFungi | YNR006W; YNR006W; YNR006W. | ||||||||||||||||||||||||||||||||||||||||||||||||
| GeneID | 855739. | ||||||||||||||||||||||||||||||||||||||||||||||||
| KEGG | sce:YNR006W. sce:YNR013C. | ||||||||||||||||||||||||||||||||||||||||||||||||
Organism-specific databases | |||||||||||||||||||||||||||||||||||||||||||||||||
| SGD | S000005289. VPS27. | ||||||||||||||||||||||||||||||||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||||||||||||||||||||||||||||||||
| eggNOG | NOG257212. | ||||||||||||||||||||||||||||||||||||||||||||||||
| GeneTree | ENSGT00670000098022. | ||||||||||||||||||||||||||||||||||||||||||||||||
| HOGENOM | HOG000000859. | ||||||||||||||||||||||||||||||||||||||||||||||||
| KO | K12182. K14430. | ||||||||||||||||||||||||||||||||||||||||||||||||
| OMA | DACMICS. | ||||||||||||||||||||||||||||||||||||||||||||||||
| OrthoDB | EOG40VZXZ. | ||||||||||||||||||||||||||||||||||||||||||||||||
Gene expression databases | |||||||||||||||||||||||||||||||||||||||||||||||||
| Genevestigator | P40343. | ||||||||||||||||||||||||||||||||||||||||||||||||
| GermOnline | YNR006W. Saccharomyces cerevisiae. | ||||||||||||||||||||||||||||||||||||||||||||||||
Family and domain databases | |||||||||||||||||||||||||||||||||||||||||||||||||
| Gene3D | 1.25.40.90. 1 hit. 3.30.40.10. 1 hit. | ||||||||||||||||||||||||||||||||||||||||||||||||
| InterPro | IPR008942. ENTH_VHS. IPR017073. Ubi-bd_Hrs_VPS27. IPR003903. Ubiquitin-int_motif. IPR002014. VHS. IPR018205. VHS_subgr. IPR000306. Znf_FYVE. IPR017455. Znf_FYVE-rel. IPR011011. Znf_FYVE_PHD. IPR013083. Znf_RING/FYVE/PHD. [Graphical view] | ||||||||||||||||||||||||||||||||||||||||||||||||
| Pfam | PF01363. FYVE. 1 hit. PF00790. VHS. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||||||||||||||||||||
| PIRSF | PIRSF036956. Hrs_Vps27. 1 hit. | ||||||||||||||||||||||||||||||||||||||||||||||||
| SMART | SM00064. FYVE. 1 hit. SM00726. UIM. 2 hits. SM00288. VHS. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||||||||||||||||||||
| SUPFAM | SSF48464. ENTH_VHS. 1 hit. SSF57903. FYVE_PHD_ZnF. 1 hit. | ||||||||||||||||||||||||||||||||||||||||||||||||
| PROSITE | PS50330. UIM. 2 hits. PS50179. VHS. 1 hit. PS50178. ZF_FYVE. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||
Other | |||||||||||||||||||||||||||||||||||||||||||||||||
| EvolutionaryTrace | P40343. | ||||||||||||||||||||||||||||||||||||||||||||||||
| NextBio | 980133. | ||||||||||||||||||||||||||||||||||||||||||||||||
Entry information
| Entry name | VPS27_YEAST | ||||||||
| Accession | Primary (citable) accession number: P40343 Secondary accession number(s): D6W1I1 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Fungal Protein Annotation Program | ||||||||
Relevant documents
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| Yeast chromosome XIV Yeast (Saccharomyces cerevisiae) chromosome XIV: entries and gene names |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
