ID ELO3_YEAST Reviewed; 345 AA. AC P40319; D6VZ09; DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot. DT 01-FEB-1995, sequence version 1. DT 27-MAR-2024, entry version 186. DE RecName: Full=Fatty acid elongase 3 {ECO:0000305}; DE EC=2.3.1.199 {ECO:0000269|PubMed:12684876}; DE AltName: Full=3-keto acyl-CoA synthase ELO3 {ECO:0000305}; DE AltName: Full=Affecting plasma membrane ATPase activity protein 1 {ECO:0000303|PubMed:8027068}; DE AltName: Full=Elongation of fatty acids protein 3 {ECO:0000303|PubMed:9211877}; DE AltName: Full=Suppressor of RAD3 essential function protein 1 {ECO:0000303|PubMed:3323825}; DE AltName: Full=Suppressor of Rvs161 and Rvs167 mutations protein 4 {ECO:0000303|PubMed:8488727}; DE AltName: Full=Very-long-chain 3-oxoacyl-CoA synthase 3 {ECO:0000305}; DE AltName: Full=v-SNARE bypass mutant gene 1 protein {ECO:0000303|PubMed:9832547}; GN Name=ELO3 {ECO:0000303|PubMed:9211877}; GN Synonyms=APA1 {ECO:0000303|PubMed:8027068}, SRE1 GN {ECO:0000303|PubMed:3323825}, SUR4 {ECO:0000303|PubMed:8488727}, VBM1 GN {ECO:0000303|PubMed:9832547}; GN OrderedLocusNames=YLR372W {ECO:0000312|SGD:S000004364}; GN ORFNames=L8039.2; OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; OC Saccharomycetales; Saccharomycetaceae; Saccharomyces. OX NCBI_TaxID=559292; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RC STRAIN=ATCC 44827 / SKQ2N; RA Revardel E.; RL Thesis (1994), University of Bordeaux II, France. RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND FUNCTION. RX PubMed=8027068; DOI=10.1016/s0021-9258(17)32419-5; RA Garcia-Arranz M., Maldonado A.M., Mazon M.J., Portillo F.; RT "Transcriptional control of yeast plasma membrane H(+)-ATPase by glucose. RT Cloning and characterization of a new gene involved in this regulation."; RL J. Biol. Chem. 269:18076-18082(1994). RN [3] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RX PubMed=8649379; DOI=10.1128/mcb.16.6.2719; RA Silve S., Leplatois P., Josse A., Dupuy P.-H., Lanau C., Kaghad M., RA Dhers C., Picard C., Rahier A., Taton M., Le Fur G., Caput D., Ferrara P., RA Loison G.; RT "The immunosuppressant SR 31747 blocks cell proliferation by inhibiting a RT steroid isomerase in Saccharomyces cerevisiae."; RL Mol. Cell. Biol. 16:2719-2727(1996). RN [4] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND SUBCELLULAR LOCATION. RX PubMed=9832547; DOI=10.1083/jcb.143.5.1167; RA David D., Sundarababu S., Gerst J.E.; RT "Involvement of long chain fatty acid elongation in the trafficking of RT secretory vesicles in yeast."; RL J. Cell Biol. 143:1167-1182(1998). RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 204508 / S288c; RX PubMed=9169871; RA Johnston M., Hillier L.W., Riles L., Albermann K., Andre B., Ansorge W., RA Benes V., Brueckner M., Delius H., Dubois E., Duesterhoeft A., RA Entian K.-D., Floeth M., Goffeau A., Hebling U., Heumann K., RA Heuss-Neitzel D., Hilbert H., Hilger F., Kleine K., Koetter P., Louis E.J., RA Messenguy F., Mewes H.-W., Miosga T., Moestl D., Mueller-Auer S., RA Nentwich U., Obermaier B., Piravandi E., Pohl T.M., Portetelle D., RA Purnelle B., Rechmann S., Rieger M., Rinke M., Rose M., Scharfe M., RA Scherens B., Scholler P., Schwager C., Schwarz S., Underwood A.P., RA Urrestarazu L.A., Vandenbol M., Verhasselt P., Vierendeels F., Voet M., RA Volckaert G., Voss H., Wambutt R., Wedler E., Wedler H., Zimmermann F.K., RA Zollner A., Hani J., Hoheisel J.D.; RT "The nucleotide sequence of Saccharomyces cerevisiae chromosome XII."; RL Nature 387:87-90(1997). RN [6] RP GENOME REANNOTATION. RC STRAIN=ATCC 204508 / S288c; RX PubMed=24374639; DOI=10.1534/g3.113.008995; RA Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R., RA Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S., RA Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.; RT "The reference genome sequence of Saccharomyces cerevisiae: Then and now."; RL G3 (Bethesda) 4:389-398(2014). RN [7] RP GENE NAME. RX PubMed=3323825; DOI=10.1007/bf00331150; RA Naumovski L., Friedberg E.C.; RT "The RAD3 gene of Saccharomyces cerevisiae: isolation and characterization RT of a temperature-sensitive mutant in the essential function and of RT extragenic suppressors of this mutant."; RL Mol. Gen. Genet. 209:458-466(1987). RN [8] RP IDENTIFICATION. RX PubMed=8488727; DOI=10.1002/yea.320090306; RA Desfarges L., Durrens P., Juguelin H., Cassagne C., Bonneu M., Aigle M.; RT "Yeast mutants affected in viability upon starvation have a modified RT phospholipid composition."; RL Yeast 9:267-277(1993). RN [9] RP FUNCTION. RX PubMed=9211877; DOI=10.1074/jbc.272.28.17376; RA Oh C.-S., Toke D.A., Mandala S., Martin C.E.; RT "ELO2 and ELO3, homologues of the Saccharomyces cerevisiae ELO1 gene, RT function in fatty acid elongation and are required for sphingolipid RT formation."; RL J. Biol. Chem. 272:17376-17384(1997). RN [10] RP SUBCELLULAR LOCATION. RX PubMed=12087109; DOI=10.1074/jbc.m205620200; RA Han G., Gable K., Kohlwein S.D., Beaudoin F., Napier J.A., Dunn T.M.; RT "The Saccharomyces cerevisiae YBR159w gene encodes the 3-ketoreductase of RT the microsomal fatty acid elongase."; RL J. Biol. Chem. 277:35440-35449(2002). RN [11] RP FUNCTION, AND CATALYTIC ACTIVITY. RX PubMed=12684876; DOI=10.1007/s00438-003-0836-0; RA Roessler H., Rieck C., Delong T., Hoja U., Schweizer E.; RT "Functional differentiation and selective inactivation of multiple RT Saccharomyces cerevisiae genes involved in very-long-chain fatty acid RT synthesis."; RL Mol. Genet. Genomics 269:290-298(2003). RN [12] RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS]. RX PubMed=14562095; DOI=10.1038/nature02026; RA Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., RA Weissman J.S., O'Shea E.K.; RT "Global analysis of protein localization in budding yeast."; RL Nature 425:686-691(2003). RN [13] RP TOPOLOGY [LARGE SCALE ANALYSIS]. RC STRAIN=ATCC 208353 / W303-1A; RX PubMed=16847258; DOI=10.1073/pnas.0604075103; RA Kim H., Melen K., Oesterberg M., von Heijne G.; RT "A global topology map of the Saccharomyces cerevisiae membrane proteome."; RL Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006). RN [14] RP FUNCTION, CATALYTIC ACTIVITY, AND MUTAGENESIS OF PHE-262 AND LYS-266. RX PubMed=17719544; DOI=10.1016/j.cell.2007.06.031; RA Denic V., Weissman J.S.; RT "A molecular caliper mechanism for determining very long-chain fatty acid RT length."; RL Cell 130:663-677(2007). RN [15] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=18407956; DOI=10.1074/mcp.m700468-mcp200; RA Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.; RT "A multidimensional chromatography technology for in-depth phosphoproteome RT analysis."; RL Mol. Cell. Proteomics 7:1389-1396(2008). RN [16] RP FUNCTION. RX PubMed=29458843; DOI=10.1016/j.micres.2017.11.001; RA Wang Q., Du X., Ma K., Shi P., Liu W., Sun J., Peng M., Huang Z.; RT "A critical role for very long-chain fatty acid elongases in oleic acid- RT mediated Saccharomyces cerevisiae cytotoxicity."; RL Microbiol. Res. 207:1-7(2018). CC -!- FUNCTION: Component of a microsomal membrane bound long-chain fatty CC acid elongation system, which produces the 20-26-carbon very long-chain CC fatty acids (VLCFA) from long-chain fatty acid precursors and is CC involved ceramide and inositol sphingolipid biosynthesis. Component of CC elongase III, which synthesizes 20-26-carbon fatty acids from 18- CC carbon-fatty acyl-CoA primers such as stearoyl-CoA by incorporation of CC malonyl-CoA (PubMed:9211877, PubMed:12684876). The enzymes active site CC faces the cytosol, whereas VLCFA length is determined by a lysine near CC the luminal end of transmembrane helix 6 (PubMed:17719544). Plays an CC important role in lipotoxic cell death induced by oleic acid through CC maintaining a balanced fatty acid composition in thr plasma membrane CC (PubMed:29458843). Affects plasma membrane H(+)-ATPase activity. May CC act on a glucose-signaling pathway that controls the expression of CC several genes that are transcriptionally regulated by glucose such as CC PMA1, HXT3 and SNF3 (PubMed:8027068). {ECO:0000269|PubMed:12684876, CC ECO:0000269|PubMed:17719544, ECO:0000269|PubMed:29458843, CC ECO:0000269|PubMed:8027068, ECO:0000269|PubMed:9211877}. CC -!- CATALYTIC ACTIVITY: CC Reaction=a very-long-chain acyl-CoA + H(+) + malonyl-CoA = a very-long- CC chain 3-oxoacyl-CoA + CO2 + CoA; Xref=Rhea:RHEA:32727, CC ChEBI:CHEBI:15378, ChEBI:CHEBI:16526, ChEBI:CHEBI:57287, CC ChEBI:CHEBI:57384, ChEBI:CHEBI:90725, ChEBI:CHEBI:90736; CC EC=2.3.1.199; Evidence={ECO:0000269|PubMed:12684876}; CC -!- CATALYTIC ACTIVITY: CC Reaction=H(+) + malonyl-CoA + octadecanoyl-CoA = 3-oxoeicosanoyl-CoA + CC CO2 + CoA; Xref=Rhea:RHEA:35319, ChEBI:CHEBI:15378, CC ChEBI:CHEBI:16526, ChEBI:CHEBI:57287, ChEBI:CHEBI:57384, CC ChEBI:CHEBI:57394, ChEBI:CHEBI:65115; CC Evidence={ECO:0000269|PubMed:17719544}; CC PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:35320; CC Evidence={ECO:0000269|PubMed:17719544}; CC -!- CATALYTIC ACTIVITY: CC Reaction=H(+) + hexadecanoyl-CoA + malonyl-CoA = 3-oxooctadecanoyl-CoA CC + CO2 + CoA; Xref=Rhea:RHEA:35315, ChEBI:CHEBI:15378, CC ChEBI:CHEBI:16526, ChEBI:CHEBI:57287, ChEBI:CHEBI:57379, CC ChEBI:CHEBI:57384, ChEBI:CHEBI:71407; CC Evidence={ECO:0000269|PubMed:17719544}; CC PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:35316; CC Evidence={ECO:0000269|PubMed:17719544}; CC -!- CATALYTIC ACTIVITY: CC Reaction=eicosanoyl-CoA + H(+) + malonyl-CoA = 3-oxodocosanoyl-CoA + CC CO2 + CoA; Xref=Rhea:RHEA:35327, ChEBI:CHEBI:15378, CC ChEBI:CHEBI:16526, ChEBI:CHEBI:57287, ChEBI:CHEBI:57380, CC ChEBI:CHEBI:57384, ChEBI:CHEBI:71451; CC Evidence={ECO:0000269|PubMed:17719544}; CC PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:35328; CC Evidence={ECO:0000269|PubMed:17719544}; CC -!- CATALYTIC ACTIVITY: CC Reaction=docosanoyl-CoA + H(+) + malonyl-CoA = 3-oxotetracosanoyl-CoA + CC CO2 + CoA; Xref=Rhea:RHEA:36507, ChEBI:CHEBI:15378, CC ChEBI:CHEBI:16526, ChEBI:CHEBI:57287, ChEBI:CHEBI:57384, CC ChEBI:CHEBI:65059, ChEBI:CHEBI:73977; CC Evidence={ECO:0000269|PubMed:17719544}; CC PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:36508; CC Evidence={ECO:0000269|PubMed:17719544}; CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane CC {ECO:0000269|PubMed:12087109, ECO:0000269|PubMed:14562095, CC ECO:0000269|PubMed:9832547}; Multi-pass membrane protein {ECO:0000305}. CC -!- DOMAIN: The HxxHH motif is essential for ELOp function in vivo and 3- CC keto acyl-CoA synthase activity in vitro. CC {ECO:0000269|PubMed:17719544}. CC -!- DOMAIN: The C-terminal di-lysine motifs may confer endoplasmic CC reticulum localization. {ECO:0000303|PubMed:9832547}. CC -!- SIMILARITY: Belongs to the ELO family. {ECO:0000305}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; L28723; AAA35134.1; -; Genomic_DNA. DR EMBL; X78326; CAA55129.1; -; Genomic_DNA. DR EMBL; X82033; CAA57553.1; -; Genomic_DNA. DR EMBL; U19103; AAB67563.1; -; Genomic_DNA. DR EMBL; AF011409; AAC28398.1; -; Genomic_DNA. DR EMBL; BK006945; DAA09675.1; -; Genomic_DNA. DR PIR; S48517; S48517. DR RefSeq; NP_013476.3; NM_001182261.3. DR AlphaFoldDB; P40319; -. DR SMR; P40319; -. DR BioGRID; 31632; 634. DR DIP; DIP-4024N; -. DR IntAct; P40319; 56. DR MINT; P40319; -. DR STRING; 4932.YLR372W; -. DR SwissLipids; SLP:000000494; -. DR GlyCosmos; P40319; 3 sites, No reported glycans. DR GlyGen; P40319; 3 sites. DR iPTMnet; P40319; -. DR MaxQB; P40319; -. DR PaxDb; 4932-YLR372W; -. DR PeptideAtlas; P40319; -. DR EnsemblFungi; YLR372W_mRNA; YLR372W; YLR372W. DR GeneID; 851087; -. DR KEGG; sce:YLR372W; -. DR AGR; SGD:S000004364; -. DR SGD; S000004364; ELO3. DR VEuPathDB; FungiDB:YLR372W; -. DR eggNOG; KOG3071; Eukaryota. DR GeneTree; ENSGT01050000244965; -. DR HOGENOM; CLU_048483_6_1_1; -. DR InParanoid; P40319; -. DR OMA; EWVPISL; -. DR OrthoDB; 2312411at2759; -. DR BioCyc; MetaCyc:MONOMER3O-70; -. DR BioCyc; YEAST:MONOMER3O-70; -. DR BioGRID-ORCS; 851087; 0 hits in 10 CRISPR screens. DR PRO; PR:P40319; -. DR Proteomes; UP000002311; Chromosome XII. DR RNAct; P40319; Protein. DR GO; GO:0005783; C:endoplasmic reticulum; IDA:SGD. DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell. DR GO; GO:0009922; F:fatty acid elongase activity; IMP:SGD. DR GO; GO:0006633; P:fatty acid biosynthetic process; IMP:SGD. DR GO; GO:0030497; P:fatty acid elongation; IMP:SGD. DR GO; GO:0034625; P:fatty acid elongation, monounsaturated fatty acid; IBA:GO_Central. DR GO; GO:0034626; P:fatty acid elongation, polyunsaturated fatty acid; IBA:GO_Central. DR GO; GO:0019367; P:fatty acid elongation, saturated fatty acid; IBA:GO_Central. DR GO; GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IGI:SGD. DR GO; GO:0006892; P:post-Golgi vesicle-mediated transport; IMP:SGD. DR GO; GO:0030148; P:sphingolipid biosynthetic process; IMP:SGD. DR GO; GO:0042761; P:very long-chain fatty acid biosynthetic process; IMP:SGD. DR InterPro; IPR030457; ELO_CS. DR InterPro; IPR002076; ELO_fam. DR PANTHER; PTHR11157:SF157; ELONGATION OF FATTY ACIDS PROTEIN 3; 1. DR PANTHER; PTHR11157; FATTY ACID ACYL TRANSFERASE-RELATED; 1. DR Pfam; PF01151; ELO; 1. DR PROSITE; PS01188; ELO; 1. PE 1: Evidence at protein level; KW Endoplasmic reticulum; Fatty acid biosynthesis; Fatty acid metabolism; KW Glycoprotein; Lipid biosynthesis; Lipid metabolism; Membrane; KW Reference proteome; Transferase; Transmembrane; Transmembrane helix. FT CHAIN 1..345 FT /note="Fatty acid elongase 3" FT /id="PRO_0000207550" FT TOPO_DOM 1..73 FT /note="Extracellular" FT /evidence="ECO:0000305|PubMed:16847258" FT TRANSMEM 74..94 FT /note="Helical; Name=1" FT /evidence="ECO:0000255" FT TOPO_DOM 95..105 FT /note="Cytoplasmic" FT /evidence="ECO:0000305|PubMed:16847258" FT TRANSMEM 106..126 FT /note="Helical; Name=2" FT /evidence="ECO:0000255" FT TOPO_DOM 127..155 FT /note="Extracellular" FT /evidence="ECO:0000305|PubMed:16847258" FT TRANSMEM 156..176 FT /note="Helical; Name=3" FT /evidence="ECO:0000255" FT TOPO_DOM 177..180 FT /note="Cytoplasmic" FT /evidence="ECO:0000305|PubMed:16847258" FT TRANSMEM 181..201 FT /note="Helical; Name=4" FT /evidence="ECO:0000255" FT TOPO_DOM 202..207 FT /note="Extracellular" FT /evidence="ECO:0000305|PubMed:16847258" FT TRANSMEM 208..228 FT /note="Helical; Name=5" FT /evidence="ECO:0000255" FT TOPO_DOM 229..242 FT /note="Cytoplasmic" FT /evidence="ECO:0000305|PubMed:16847258" FT TRANSMEM 243..263 FT /note="Helical; Name=6" FT /evidence="ECO:0000255" FT TOPO_DOM 264..283 FT /note="Extracellular" FT /evidence="ECO:0000305|PubMed:16847258" FT TRANSMEM 284..304 FT /note="Helical; Name=7" FT /evidence="ECO:0000255" FT TOPO_DOM 305..345 FT /note="Cytoplasmic" FT /evidence="ECO:0000269|PubMed:16847258" FT REGION 318..345 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT MOTIF 185..189 FT /note="HxxHH motif" FT /evidence="ECO:0000305|PubMed:17719544" FT MOTIF 308..311 FT /note="Di-lysine motif 1" FT /evidence="ECO:0000303|PubMed:9832547" FT MOTIF 312..315 FT /note="Di-lysine motif 2" FT /evidence="ECO:0000303|PubMed:9832547" FT MOTIF 316..319 FT /note="Di-lysine motif 3" FT /evidence="ECO:0000303|PubMed:9832547" FT COMPBIAS 320..339 FT /note="Polar residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT SITE 266 FT /note="Determines the chain length of the elongated VLCFA" FT /evidence="ECO:0000305|PubMed:17719544" FT CARBOHYD 2 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498" FT CARBOHYD 20 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498" FT CARBOHYD 66 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498" FT MUTAGEN 262 FT /note="F->K: Terminates elongation following the production FT of C22 instead of C-26; when associated with L-266." FT /evidence="ECO:0000269|PubMed:17719544" FT MUTAGEN 266 FT /note="K->L: Terminates elongation following the production FT of C22 instead of C-26; when associated with K-262." FT /evidence="ECO:0000269|PubMed:17719544" FT CONFLICT 35 FT /note="E -> D (in Ref. 2; CAA55129)" FT /evidence="ECO:0000305" FT CONFLICT 208 FT /note="W -> R (in Ref. 2; CAA55129)" FT /evidence="ECO:0000305" FT CONFLICT 330..331 FT /note="ST -> FY (in Ref. 2; CAA55129)" FT /evidence="ECO:0000305" SQ SEQUENCE 345 AA; 39465 MW; 1303A9AC54BFFCC5 CRC64; MNTTTSTVIA AVADQFQSLN SSSSCFLKVH VPSIENPFGI ELWPIFSKVF EYFSGYPAEQ FEFIHNKTFL ANGYHAVSII IVYYIIIFGG QAILRALNAS PLKFKLLFEI HNLFLTSISL VLWLLMLEQL VPMVYHNGLF WSICSKEAFA PKLVTLYYLN YLTKFVELID TVFLVLRRKK LLFLHTYHHG ATALLCYTQL IGRTSVEWVV ILLNLGVHVI MYWYYFLSSC GIRVWWKQWV TRFQIIQFLI DLVFVYFATY TFYAHKYLDG ILPNKGTCYG TQAAAAYGYL ILTSYLLLFI SFYIQSYKKG GKKTVKKESE VSGSVASGSS TGVKTSNTKV SSRKA //