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Reviewed, UniProtKB/Swiss-Prot P40093 (YEY6_YEAST)

Last modified November 3, 2009. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    UPF0160 protein YER156C
Gene names
Ordered Locus Names: YER156C
OrganismSaccharomyces cerevisiae (Baker's yeast) [Complete proteome]
Taxonomic identifier4932 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length338 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Miscellaneous

Present with 6080 molecules/cell in log phase SD medium. Ref.3

Sequence similarities

Belongs to the UPF0160 (MYG1) family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentcytoplasm

Inferred from direct assay. Source: SGD

nucleus

Inferred from direct assay. Source: SGD

   Molecular functionidentical protein binding

Inferred from physical interaction. Source: IntAct

Complete GO annotation...

Binary interactions

With

Entry

#Exp.

IntAct

Notes

itself1EBI-22730,EBI-22730
TEF1P029941EBI-22730,EBI-6314

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 338338UPF0160 protein YER156C
PRO_0000213487

Sequences

Sequence LengthMass (Da)Tools
P40093-1 [UniParc].

Last modified February 1, 1995. Version 1.
Checksum: 5E13FC27EFE911FF

FASTA33838,174
        10         20         30         40         50         60 
MNSVKRVKLN SKMSKQICTH SGSFHADESL AVYMLRLLPE FKDAKLVRSR NPKDWEASDI 

        70         80         90        100        110        120 
LVDVGAQYDG VKFFDHHQRG FFETFNEKYK TKLSSAGLIF KHYGRDIIKT ILNNKVSSSD 

       130        140        150        160        170        180 
LDLLYDKVYK QFVEALDAND NGISKYTIPK DSNLEPNFRD NAISIPGIIS GMNPNWNEDT 

       190        200        210        220        230        240 
SDESFDRCFA RASEFIGGVF VTLVRGYGQS WLPAKALVAQ AIDERMDVDK SGKIIVLPQF 

       250        260        270        280        290        300 
CPWKEHLYEL EREKNIEKQI EFVLFTDSSG AWRVSTVPIN STSFQFRRGL PEPLRGLRDE 

       310        320        330 
ELSTKSGVPG CIFIHAAGFI GGAKSKEAVY ELAKMSLA 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome V."
Dietrich F.S., Mulligan J.T., Hennessy K.M., Yelton M.A., Allen E., Araujo R., Aviles E., Berno A., Brennan T., Carpenter J., Chen E., Cherry J.M., Chung E., Duncan M., Guzman E., Hartzell G., Hunicke-Smith S., Hyman R.W. expand/collapse author list , Kayser A., Komp C., Lashkari D., Lew H., Lin D., Mosedale D., Nakahara K., Namath A., Norgren R., Oefner P., Oh C., Petel F.X., Roberts D., Sehl P., Schramm S., Shogren T., Smith V., Taylor P., Wei Y., Botstein D., Davis R.W.
Nature 387:78-81(1997) [PubMed: 9169868] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204511 / S288c / AB972.
[2]"Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae."
Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. expand/collapse author list , Simpson A.J.G., Bulyk M.L., Harlow E., Marsischky G., Kolodner R.D., LaBaer J.
Genome Res. 17:536-543(2007) [PubMed: 17322287] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[3]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed: 14562106] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

U18917 Genomic DNA. Translation: AAB64683.1.
AY557786 Genomic DNA. Translation: AAS56112.1.
PIRS50659.
RefSeqNP_011083.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

DIPDIP:4187N.
IntActP40093. 6 interactions.
STRINGP40093.

Proteomic databases

PeptideAtlasP40093.

Genome annotation databases

EnsemblYER156C; YER156C; YER156C; Saccharomyces cerevisiae. [Genome view]
GeneID856900.
GenomeReviewsGene locus YER156C in contig U00092_GR.
KEGGsce:YER156C.
NMPDRfig|4932.3.peg.2166.

Organism-specific databases

CYGDYER156c.
SGDS000000958. YER156C.

Phylogenomic databases

HOGENOMP40093.
OMALVYKHFG.

Gene expression databases

ArrayExpressP40093.
GenevestigatorP40093.
GermOnlineYER156C. Saccharomyces cerevisiae.

Family and domain databases

InterProIPR003226. Met-dep_prot_hydro.
[Graphical view]
PANTHERPTHR11215. Met-dep_prot_hydro. 1 hit.
PfamPF03690. UPF0160. 1 hit.
[Graphical view]
ProDomPD034736. Metdp_prot_hydro. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetSearch...

Other Resources

NextBio983322.

Entry information

Entry nameYEY6_YEAST
AccessionPrimary (citable) accession number: P40093
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: November 3, 2009
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectFPAP (Fungal Proteome Annotation Project)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Yeast chromosome V

Yeast (Saccharomyces cerevisiae) chromosome V: entries and gene names

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents