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P40093 (YEY6_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 106. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
UPF0160 protein YER156C
Gene names
Ordered Locus Names:YER156C
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length338 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Miscellaneous

Present with 6080 molecules/cell in log phase SD medium.

Sequence similarities

Belongs to the UPF0160 (MYG1) family.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Binary interactions

With

Entry

#Exp.

IntAct

Notes

itself1EBI-22730,EBI-22730
TEF1P029941EBI-22730,EBI-6314

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 338338UPF0160 protein YER156C
PRO_0000213487

Sequences

Sequence LengthMass (Da)Tools
P40093 [UniParc].

Last modified February 1, 1995. Version 1.
Checksum: 5E13FC27EFE911FF

FASTA33838,174
        10         20         30         40         50         60 
MNSVKRVKLN SKMSKQICTH SGSFHADESL AVYMLRLLPE FKDAKLVRSR NPKDWEASDI 

        70         80         90        100        110        120 
LVDVGAQYDG VKFFDHHQRG FFETFNEKYK TKLSSAGLIF KHYGRDIIKT ILNNKVSSSD 

       130        140        150        160        170        180 
LDLLYDKVYK QFVEALDAND NGISKYTIPK DSNLEPNFRD NAISIPGIIS GMNPNWNEDT 

       190        200        210        220        230        240 
SDESFDRCFA RASEFIGGVF VTLVRGYGQS WLPAKALVAQ AIDERMDVDK SGKIIVLPQF 

       250        260        270        280        290        300 
CPWKEHLYEL EREKNIEKQI EFVLFTDSSG AWRVSTVPIN STSFQFRRGL PEPLRGLRDE 

       310        320        330 
ELSTKSGVPG CIFIHAAGFI GGAKSKEAVY ELAKMSLA 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome V."
Dietrich F.S., Mulligan J.T., Hennessy K.M., Yelton M.A., Allen E., Araujo R., Aviles E., Berno A., Brennan T., Carpenter J., Chen E., Cherry J.M., Chung E., Duncan M., Guzman E., Hartzell G., Hunicke-Smith S., Hyman R.W. expand/collapse author list , Kayser A., Komp C., Lashkari D., Lew H., Lin D., Mosedale D., Nakahara K., Namath A., Norgren R., Oefner P., Oh C., Petel F.X., Roberts D., Sehl P., Schramm S., Shogren T., Smith V., Taylor P., Wei Y., Botstein D., Davis R.W.
Nature 387:78-81(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]"The reference genome sequence of Saccharomyces cerevisiae: Then and now."
Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R., Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S., Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.
G3 (Bethesda) 4:389-398(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae."
Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. expand/collapse author list , Simpson A.J.G., Bulyk M.L., Harlow E., Marsischky G., Kolodner R.D., LaBaer J.
Genome Res. 17:536-543(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[4]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U18917 Genomic DNA. Translation: AAB64683.1.
AY557786 Genomic DNA. Translation: AAS56112.1.
BK006939 Genomic DNA. Translation: DAA07817.1.
PIRS50659.
RefSeqNP_011083.3. NM_001179046.3.

3D structure databases

ProteinModelPortalP40093.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid36906. 46 interactions.
DIPDIP-4187N.
IntActP40093. 3 interactions.
MINTMINT-473991.
STRING4932.YER156C.

Proteomic databases

MaxQBP40093.
PaxDbP40093.
PeptideAtlasP40093.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYER156C; YER156C; YER156C.
GeneID856900.
KEGGsce:YER156C.

Organism-specific databases

CYGDYER156c.
SGDS000000958. YER156C.

Phylogenomic databases

eggNOGCOG4286.
GeneTreeENSGT00390000010265.
HOGENOMHOG000208845.
OMACVFVHAA.
OrthoDBEOG7712J9.

Enzyme and pathway databases

BioCycYEAST:G3O-30317-MONOMER.

Gene expression databases

GenevestigatorP40093.

Family and domain databases

InterProIPR003226. Met-dep_prot_hydro.
[Graphical view]
PANTHERPTHR11215. PTHR11215. 1 hit.
PfamPF03690. UPF0160. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio983322.

Entry information

Entry nameYEY6_YEAST
AccessionPrimary (citable) accession number: P40093
Secondary accession number(s): D3DM63
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: May 14, 2014
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome V

Yeast (Saccharomyces cerevisiae) chromosome V: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families