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P40063

- RT105_YEAST

UniProt

P40063 - RT105_YEAST

Protein

Regulator of Ty1 transposition protein 105

Gene

RTT105

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 90 (01 Oct 2014)
      Sequence version 1 (01 Feb 1995)
      Previous versions | rss
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    Functioni

    Involved in regulation of Ty1 transposition. Inhibits Ty1 transposition at a post-transcriptional and pre-integrational stage of the Ty1 retrotransposition cycle.1 Publication

    GO - Biological processi

    1. negative regulation of transposition, RNA-mediated Source: SGD
    2. transposition Source: UniProtKB-KW

    Keywords - Biological processi

    Transposition

    Enzyme and pathway databases

    BioCyciYEAST:G3O-30269-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Regulator of Ty1 transposition protein 105
    Gene namesi
    Name:RTT105
    Ordered Locus Names:YER104W
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome V

    Organism-specific databases

    CYGDiYER104w.
    SGDiS000000906. RTT105.

    Subcellular locationi

    Cytoplasm 1 Publication. Nucleus 1 Publication

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    2. nucleus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm, Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 208208Regulator of Ty1 transposition protein 105PRO_0000202644Add
    BLAST

    Proteomic databases

    PaxDbiP40063.

    Expressioni

    Gene expression databases

    GenevestigatoriP40063.

    Interactioni

    Protein-protein interaction databases

    BioGridi36850. 26 interactions.
    DIPiDIP-2766N.
    IntActiP40063. 3 interactions.
    MINTiMINT-486951.
    STRINGi4932.YER104W.

    Structurei

    3D structure databases

    ProteinModelPortaliP40063.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG136304.
    OrthoDBiEOG7JHMJB.

    Sequencei

    Sequence statusi: Complete.

    P40063-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYSNHNLNSD DCCFDWNEEK AAELQRTGVS FDRSLTPQSL RTSTRRLSEE    50
    NKQQSGTMHI DTSPSVVSDI ISSRRDRSQD FFGPHSSSPI APSERQRADQ 100
    RSRLESMRLT RRRDKMTKVR GGLEKMEEMI MQGEHLREMQ RLKQEAQKNA 150
    LPSDMAEYME WQNNEDLEDD ELLAFIEKQE TYKNELEHFL NNANKNVYEN 200
    NSYPNSHT 208
    Length:208
    Mass (Da):24,413
    Last modified:February 1, 1995 - v1
    Checksum:iFE14F6F48E8232E7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U18839 Genomic DNA. Translation: AAB64659.1.
    AY692872 Genomic DNA. Translation: AAT92891.1.
    BK006939 Genomic DNA. Translation: DAA07765.1.
    PIRiS50607.
    RefSeqiNP_011030.3. NM_001178995.3.

    Genome annotation databases

    EnsemblFungiiYER104W; YER104W; YER104W.
    GeneIDi856841.
    KEGGisce:YER104W.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U18839 Genomic DNA. Translation: AAB64659.1 .
    AY692872 Genomic DNA. Translation: AAT92891.1 .
    BK006939 Genomic DNA. Translation: DAA07765.1 .
    PIRi S50607.
    RefSeqi NP_011030.3. NM_001178995.3.

    3D structure databases

    ProteinModelPortali P40063.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 36850. 26 interactions.
    DIPi DIP-2766N.
    IntActi P40063. 3 interactions.
    MINTi MINT-486951.
    STRINGi 4932.YER104W.

    Proteomic databases

    PaxDbi P40063.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YER104W ; YER104W ; YER104W .
    GeneIDi 856841.
    KEGGi sce:YER104W.

    Organism-specific databases

    CYGDi YER104w.
    SGDi S000000906. RTT105.

    Phylogenomic databases

    eggNOGi NOG136304.
    OrthoDBi EOG7JHMJB.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-30269-MONOMER.

    Miscellaneous databases

    NextBioi 983156.

    Gene expression databases

    Genevestigatori P40063.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    2. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    4. "Multiple regulators of Ty1 transposition in Saccharomyces cerevisiae have conserved roles in genome maintenance."
      Scholes D.T., Banerjee M., Bowen B., Curcio M.J.
      Genetics 159:1449-1465(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: FUNCTION.
    5. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
    6. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
    7. "A multidimensional chromatography technology for in-depth phosphoproteome analysis."
      Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
      Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    8. "Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution."
      Holt L.J., Tuch B.B., Villen J., Johnson A.D., Gygi S.P., Morgan D.O.
      Science 325:1682-1686(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiRT105_YEAST
    AccessioniPrimary (citable) accession number: P40063
    Secondary accession number(s): D3DM11
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: February 1, 1995
    Last modified: October 1, 2014
    This is version 90 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 259 molecules/cell in log phase SD medium.1 Publication

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    2. Yeast chromosome V
      Yeast (Saccharomyces cerevisiae) chromosome V: entries and gene names

    External Data

    Dasty 3