Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P40055

- UTP7_YEAST

UniProt

P40055 - UTP7_YEAST

Protein

U3 small nucleolar RNA-associated protein 7

Gene

UTP7

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 123 (01 Oct 2014)
      Sequence version 1 (01 Feb 1995)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Involved in nucleolar processing of pre-18S ribosomal RNA.1 Publication

    GO - Biological processi

    1. endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Source: SGD
    2. endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Source: SGD
    3. endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Source: SGD
    4. maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Source: SGD

    Keywords - Molecular functioni

    Ribonucleoprotein

    Keywords - Biological processi

    Ribosome biogenesis, rRNA processing

    Enzyme and pathway databases

    BioCyciYEAST:G3O-30252-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    U3 small nucleolar RNA-associated protein 7
    Short name:
    U3 snoRNA-associated protein 7
    Alternative name(s):
    U three protein 7
    Gene namesi
    Name:UTP7
    Synonyms:KRE31
    Ordered Locus Names:YER082C
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome V

    Organism-specific databases

    CYGDiYER082c.
    SGDiS000000884. UTP7.

    Subcellular locationi

    Nucleusnucleolus 1 Publication

    GO - Cellular componenti

    1. nucleolus Source: SGD
    2. small-subunit processome Source: SGD

    Keywords - Cellular componenti

    Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 554554U3 small nucleolar RNA-associated protein 7PRO_0000051319Add
    BLAST

    Proteomic databases

    MaxQBiP40055.
    PaxDbiP40055.
    PeptideAtlasiP40055.

    Expressioni

    Gene expression databases

    GenevestigatoriP40055.

    Interactioni

    Subunit structurei

    Interacts with snoRNA U3. Interacts with MPP10. Component of the ribosomal small subunit (SSU) processome composed of at least 40 protein subunits and snoRNA U3.1 Publication

    Protein-protein interaction databases

    BioGridi36827. 82 interactions.
    DIPiDIP-5398N.
    IntActiP40055. 48 interactions.
    MINTiMINT-513710.
    STRINGi4932.YER082C.

    Structurei

    3D structure databases

    ProteinModelPortaliP40055.
    SMRiP40055. Positions 95-182, 203-368.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Repeati108 – 14942WD 1Add
    BLAST
    Repeati230 – 26940WD 2Add
    BLAST
    Repeati272 – 31140WD 3Add
    BLAST
    Repeati314 – 35138WD 4Add
    BLAST

    Sequence similaritiesi

    Contains 4 WD repeats.PROSITE-ProRule annotation

    Keywords - Domaini

    Repeat, WD repeat

    Phylogenomic databases

    eggNOGiNOG301990.
    GeneTreeiENSGT00390000007075.
    HOGENOMiHOG000165037.
    KOiK14768.
    OMAiNVIDQRK.
    OrthoDBiEOG786HCW.

    Family and domain databases

    Gene3Di2.130.10.10. 1 hit.
    InterProiIPR012952. BING4_C_dom.
    IPR015943. WD40/YVTN_repeat-like_dom.
    IPR001680. WD40_repeat.
    IPR019775. WD40_repeat_CS.
    IPR017986. WD40_repeat_dom.
    [Graphical view]
    PfamiPF08149. BING4CT. 1 hit.
    PF00400. WD40. 1 hit.
    [Graphical view]
    SMARTiSM01033. BING4CT. 1 hit.
    SM00320. WD40. 3 hits.
    [Graphical view]
    SUPFAMiSSF50978. SSF50978. 1 hit.
    PROSITEiPS00678. WD_REPEATS_1. 1 hit.
    PS50082. WD_REPEATS_2. 1 hit.
    PS50294. WD_REPEATS_REGION. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P40055-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGHKKNGHRR QIKERENQNK FERSTYTNNA KNNHTQTKDK KLRAGLKKID    50
    EQYKKAVSSA AATDYLLPES NGYLEPENEL EKTFKVQQSE IKSSVDVSTA 100
    NKALDLSLKE FGPYHIKYAK NGTHLLITGR KGHVASMDWR KGQLRAELFL 150
    NETCHSATYL QNEQYFAVAQ KKYTFIYDHE GTELHRLKQH IEARHLDFLP 200
    YHYLLVTAGE TGWLKYHDVS TGQLVSELRT KAGPTMAMAQ NPWNAVMHLG 250
    HSNGTVSLWS PSMPEPLVKL LSARGPVNSI AIDRSGYYMA TTGADRSMKI 300
    WDIRNFKQLH SVESLPTPGT NVSISDTGLL ALSRGPHVTL WKDALKLSGD 350
    SKPCFGSMGG NPHRNTPYMS HLFAGNKVEN LGFVPFEDLL GVGHQTGITN 400
    LIVPGAGEAN YDALELNPFE TKKQRQEQEV RTLLNKLPAD TITLDPNSIG 450
    SVDKRSSTIR LNAKDLAQTT MDANNKAKTN SDIPDVKPDV KGKNSGLRSF 500
    LRKKTQNVID ERKLRVQKQL DKEKNIRKRN HQIKQGLISE DHKDVIEEAL 550
    SRFG 554
    Length:554
    Mass (Da):62,317
    Last modified:February 1, 1995 - v1
    Checksum:iA254AD9AC1142AA5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U18839 Genomic DNA. Translation: AAB64637.1.
    BK006939 Genomic DNA. Translation: DAA07743.1.
    PIRiS50585.
    RefSeqiNP_011005.1. NM_001178973.1.

    Genome annotation databases

    EnsemblFungiiYER082C; YER082C; YER082C.
    GeneIDi856815.
    KEGGisce:YER082C.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U18839 Genomic DNA. Translation: AAB64637.1 .
    BK006939 Genomic DNA. Translation: DAA07743.1 .
    PIRi S50585.
    RefSeqi NP_011005.1. NM_001178973.1.

    3D structure databases

    ProteinModelPortali P40055.
    SMRi P40055. Positions 95-182, 203-368.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 36827. 82 interactions.
    DIPi DIP-5398N.
    IntActi P40055. 48 interactions.
    MINTi MINT-513710.
    STRINGi 4932.YER082C.

    Proteomic databases

    MaxQBi P40055.
    PaxDbi P40055.
    PeptideAtlasi P40055.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YER082C ; YER082C ; YER082C .
    GeneIDi 856815.
    KEGGi sce:YER082C.

    Organism-specific databases

    CYGDi YER082c.
    SGDi S000000884. UTP7.

    Phylogenomic databases

    eggNOGi NOG301990.
    GeneTreei ENSGT00390000007075.
    HOGENOMi HOG000165037.
    KOi K14768.
    OMAi NVIDQRK.
    OrthoDBi EOG786HCW.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-30252-MONOMER.

    Miscellaneous databases

    NextBioi 983088.
    PROi P40055.

    Gene expression databases

    Genevestigatori P40055.

    Family and domain databases

    Gene3Di 2.130.10.10. 1 hit.
    InterProi IPR012952. BING4_C_dom.
    IPR015943. WD40/YVTN_repeat-like_dom.
    IPR001680. WD40_repeat.
    IPR019775. WD40_repeat_CS.
    IPR017986. WD40_repeat_dom.
    [Graphical view ]
    Pfami PF08149. BING4CT. 1 hit.
    PF00400. WD40. 1 hit.
    [Graphical view ]
    SMARTi SM01033. BING4CT. 1 hit.
    SM00320. WD40. 3 hits.
    [Graphical view ]
    SUPFAMi SSF50978. SSF50978. 1 hit.
    PROSITEi PS00678. WD_REPEATS_1. 1 hit.
    PS50082. WD_REPEATS_2. 1 hit.
    PS50294. WD_REPEATS_REGION. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    2. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    3. Cited for: FUNCTION, INTERACTION WITH MPP10 AND SNORNA U3, IDENTIFICATION IN SSU PROCESSOME BY MASS SPECTROMETRY, SUBCELLULAR LOCATION.
    4. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiUTP7_YEAST
    AccessioniPrimary (citable) accession number: P40055
    Secondary accession number(s): D3DLY9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: February 1, 1995
    Last modified: October 1, 2014
    This is version 123 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 5800 molecules/cell in log phase SD medium.1 Publication

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families
    2. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    3. Yeast chromosome V
      Yeast (Saccharomyces cerevisiae) chromosome V: entries and gene names

    External Data

    Dasty 3