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P40011 (YEK0_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YER010C
Gene names
Ordered Locus Names:YER010C
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces ›

Protein attributes

Sequence length234 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Miscellaneous

Present with 846 molecules/cell in log phase SD medium.

Ontologies

Keywords
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 234234Uncharacterized protein YER010C
PRO_0000202621

Secondary structure

1 ............................................... 234
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P40011 [UniParc].

Last modified February 1, 1995. Version 1.
Checksum: EC109F224240F980

FASTA23425,563
        10         20         30         40         50         60 
MSDLQKLQRF STCDISDGLL NVYNIPTGGY FPNLTAISPP QNSSIVGTAY TVLFAPIDDP 

        70         80         90        100        110        120 
RPAVNYIDSV PPNSILVLAL EPHLQSQFHP FIKITQAMYG GLMSTRAQYL KSNGTVVFGR 

       130        140        150        160        170        180 
IRDVDEHRTL NHPVFAYGVG SCAPKAVVKA VGTNVQLKIL TSDGVTQTIC PGDYIAGDNN 

       190        200        210        220        230 
GIVRIPVQET DISKLVTYIE KSIEVDLLVS EDIKNGIPAK QAQNDRRSVL KKYI

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome V."
Dietrich F.S., Mulligan J.T., Hennessy K.M., Yelton M.A., Allen E., Araujo R., Aviles E., Berno A., Brennan T., Carpenter J., Chen E., Cherry J.M., Chung E., Duncan M., Guzman E., Hartzell G., Hunicke-Smith S., Hyman R.W. expand/collapse author list , Kayser A., Komp C., Lashkari D., Lew H., Lin D., Mosedale D., Nakahara K., Namath A., Norgren R., Oefner P., Oh C., Petel F.X., Roberts D., Sehl P., Schramm S., Shogren T., Smith V., Taylor P., Wei Y., Botstein D., Davis R.W.
Nature 387:78-81(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204511 / S288c / AB972.
[2]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U18778 Genomic DNA. Translation: AAB64543.1.
BK006939 Genomic DNA. Translation: DAA07661.1.
PIRS50468.
RefSeqNP_010926.3. NM_001178901.3.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2C5QX-ray1.70A/B/C/D/E/F1-234[»]
ProteinModelPortalP40011.
SMRP40011. Positions 2-234.
ModBaseSearch...

Protein-protein interaction databases

DIPDIP-4095N.
IntActP40011. 1 interaction.
MINTMINT-536635.
STRING4932.YER010C.

Proteomic databases

PaxDbP40011.
PeptideAtlasP40011.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYER010C; YER010C; YER010C.
GeneID856728.
KEGGsce:YER010C.
sce:YER013W.

Organism-specific databases

CYGDYER010c.
SGDS000000812. YER010C.

Phylogenomic databases

eggNOGCOG0684.
HOGENOMHOG000107599.
KOK12818.
OMAIRDLDEH.
OrthoDBEOG4R53C4.

Gene expression databases

GenevestigatorP40011.
GermOnlineYER010C. Saccharomyces cerevisiae.

Family and domain databases

Gene3D3.50.30.40. 1 hit.
InterProIPR005493. RNase_E_inh/diMeMenaQ_MeTrfase.
[Graphical view]
PfamPF03737. Methyltransf_6. 1 hit.
[Graphical view]
SUPFAMSSF89562. RNaseE_inh/diMeMenaQ_MeTrfase. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceP40011.
NextBio982835.

Entry information

Entry nameYEK0_YEAST
AccessionPrimary (citable) accession number: P40011
Secondary accession number(s): D3DLQ7
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: April 3, 2013
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Yeast chromosome V

Yeast (Saccharomyces cerevisiae) chromosome V: entries and gene names

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

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