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Protein

Zinc finger protein YER130C

Gene

YER130C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri389 – 41224C2H2-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri418 – 44023C2H2-type 2PROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Enzyme and pathway databases

BioCyciYEAST:G3O-30293-MONOMER.
ReactomeiR-SCE-3214841. PKMTs methylate histone lysines.

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein YER130C
Gene namesi
Ordered Locus Names:YER130C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome V

Organism-specific databases

EuPathDBiFungiDB:YER130C.
SGDiS000000932. YER130C.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 443443Zinc finger protein YER130CPRO_0000046862Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi36874. 21 interactions.
IntActiP39959. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliP39959.
SMRiP39959. Positions 329-440.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 2 C2H2-type zinc fingers.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri389 – 41224C2H2-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri418 – 44023C2H2-type 2PROSITE-ProRule annotationAdd
BLAST

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

GeneTreeiENSGT00530000063676.
HOGENOMiHOG000155539.
InParanoidiP39959.
OMAiRSLHMCE.
OrthoDBiEOG092C48TD.

Family and domain databases

Gene3Di3.30.160.60. 2 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00096. zf-C2H2. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P39959-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLYPLQRFE SNDTVFSYTL NSKTELFNES RNNDKQHFTL QLIPNANANA
60 70 80 90 100
KEIDNNNVEI INDLTGNTIV DNCVTTATSS NQLERRLSIS DYRTENGNYY
110 120 130 140 150
EYEFFGRREL NEPLFNNDIV ENDDDIDLNN ESDVLMVSDD ELEVNERFSF
160 170 180 190 200
LKQQPLDGLN RISSTNNLKN LEIHEFIIDP TENIDDELED SFTTVPQSKK
210 220 230 240 250
KVRDYFKLNI FGSSSSSNNN SNSLGCEPIQ TENSSSQKMF KNRFFRSRKS
260 270 280 290 300
TLIKSLPLEQ ENEVLINSGF DVSSNEESDE SDHAIINPLK LVGNNKDIST
310 320 330 340 350
QSIAKTTNPF KSGSDFKMIE PVSKFSNDSR KDLLAAISEP SSSPSPSAPS
360 370 380 390 400
PSVQSSSSSH GLVVRKKTGS MQKTRGRKPS LIPDASKQFG CEFCDRRFKR
410 420 430 440
QEHLKRHVRS LHMCEKPFTC HICNKNFSRS DNLNQHVKTH ASL
Length:443
Mass (Da):50,320
Last modified:October 1, 1996 - v2
Checksum:i639A9FBB11C7E135
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18916 Genomic DNA. Translation: AAC03228.1.
BK006939 Genomic DNA. Translation: DAA07790.1.
PIRiS50633.
RefSeqiNP_011056.1. NM_001179020.1.

Genome annotation databases

EnsemblFungiiYER130C; YER130C; YER130C.
GeneIDi856867.
KEGGisce:YER130C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18916 Genomic DNA. Translation: AAC03228.1.
BK006939 Genomic DNA. Translation: DAA07790.1.
PIRiS50633.
RefSeqiNP_011056.1. NM_001179020.1.

3D structure databases

ProteinModelPortaliP39959.
SMRiP39959. Positions 329-440.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi36874. 21 interactions.
IntActiP39959. 1 interaction.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYER130C; YER130C; YER130C.
GeneIDi856867.
KEGGisce:YER130C.

Organism-specific databases

EuPathDBiFungiDB:YER130C.
SGDiS000000932. YER130C.

Phylogenomic databases

GeneTreeiENSGT00530000063676.
HOGENOMiHOG000155539.
InParanoidiP39959.
OMAiRSLHMCE.
OrthoDBiEOG092C48TD.

Enzyme and pathway databases

BioCyciYEAST:G3O-30293-MONOMER.
ReactomeiR-SCE-3214841. PKMTs methylate histone lysines.

Miscellaneous databases

PROiP39959.

Family and domain databases

Gene3Di3.30.160.60. 2 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00096. zf-C2H2. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYEW0_YEAST
AccessioniPrimary (citable) accession number: P39959
Secondary accession number(s): D3DM36
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: October 1, 1996
Last modified: September 7, 2016
This is version 115 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome V
    Yeast (Saccharomyces cerevisiae) chromosome V: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.