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P39902

- SPRT_ECOLI

UniProt

P39902 - SPRT_ECOLI

Protein

Protein SprT

Gene

sprT

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
  1. Functioni

    Involved in bolA gene expression at the stationary phase.

    Cofactori

    Binds 1 zinc ion.Curated

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi78 – 781ZincSequence Analysis
    Active sitei79 – 791Sequence Analysis
    Metal bindingi82 – 821ZincSequence Analysis

    GO - Molecular functioni

    1. zinc ion binding Source: UniProtKB-HAMAP

    Keywords - Ligandi

    Metal-binding, Zinc

    Enzyme and pathway databases

    BioCyciEcoCyc:EG12122-MONOMER.
    ECOL316407:JW2911-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein SprT
    Gene namesi
    Name:sprT
    Synonyms:yggI
    Ordered Locus Names:b2944, JW2911
    OrganismiEscherichia coli (strain K12)
    Taxonomic identifieri83333 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

    Organism-specific databases

    EcoGeneiEG12122. sprT.

    Subcellular locationi

    Cytoplasm Curated

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 165165Protein SprTPRO_0000213266Add
    BLAST

    Proteomic databases

    PaxDbiP39902.
    PRIDEiP39902.

    Expressioni

    Gene expression databases

    GenevestigatoriP39902.

    Interactioni

    Protein-protein interaction databases

    IntActiP39902. 7 interactions.
    STRINGi511145.b2944.

    Structurei

    3D structure databases

    ProteinModelPortaliP39902.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini20 – 163144SprT-likeAdd
    BLAST

    Sequence similaritiesi

    Belongs to the SprT family.Curated
    Contains 1 SprT-like domain.Curated

    Phylogenomic databases

    eggNOGiCOG3091.
    HOGENOMiHOG000281171.
    KOiK02742.
    OMAiPHEVAHL.
    OrthoDBiEOG661H7V.

    Family and domain databases

    HAMAPiMF_00746. SprT.
    InterProiIPR006640. SprT-like_domain.
    IPR023483. Uncharacterised_SprT.
    [Graphical view]
    PfamiPF10263. SprT-like. 1 hit.
    [Graphical view]
    SMARTiSM00731. SprT. 1 hit.
    [Graphical view]
    PROSITEiPS00142. ZINC_PROTEASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P39902-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKTSRLPIAI QQAVMRRLRE KLAQANLKLG RNYPEPKLSY TQRGTSAGTA    50
    WLESYEIRLN PVLLLENSEA FIEEVVPHEL AHLLVWKHFG RVAPHGKEWK 100
    WMMENVLGVP ARRTHQFELQ SVRRNTFPYR CKCQEHQLTV RRHNRVVRGE 150
    AVYRCVHCGE QLVAK 165
    Length:165
    Mass (Da):19,348
    Last modified:February 1, 1995 - v1
    Checksum:iF5E4A3992DD091B4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D83644 Genomic DNA. Translation: BAA12021.1.
    U28377 Genomic DNA. Translation: AAA69111.1.
    U00096 Genomic DNA. Translation: AAC75981.1.
    AP009048 Genomic DNA. Translation: BAE77007.1.
    X65169 Genomic DNA. No translation available.
    PIRiG65079.
    RefSeqiNP_417419.1. NC_000913.3.
    YP_491143.1. NC_007779.1.

    Genome annotation databases

    EnsemblBacteriaiAAC75981; AAC75981; b2944.
    BAE77007; BAE77007; BAE77007.
    GeneIDi12930537.
    947443.
    KEGGiecj:Y75_p2874.
    eco:b2944.
    PATRICi32121298. VBIEscCol129921_3037.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D83644 Genomic DNA. Translation: BAA12021.1 .
    U28377 Genomic DNA. Translation: AAA69111.1 .
    U00096 Genomic DNA. Translation: AAC75981.1 .
    AP009048 Genomic DNA. Translation: BAE77007.1 .
    X65169 Genomic DNA. No translation available.
    PIRi G65079.
    RefSeqi NP_417419.1. NC_000913.3.
    YP_491143.1. NC_007779.1.

    3D structure databases

    ProteinModelPortali P39902.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi P39902. 7 interactions.
    STRINGi 511145.b2944.

    Proteomic databases

    PaxDbi P39902.
    PRIDEi P39902.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAC75981 ; AAC75981 ; b2944 .
    BAE77007 ; BAE77007 ; BAE77007 .
    GeneIDi 12930537.
    947443.
    KEGGi ecj:Y75_p2874.
    eco:b2944.
    PATRICi 32121298. VBIEscCol129921_3037.

    Organism-specific databases

    EchoBASEi EB2043.
    EcoGenei EG12122. sprT.

    Phylogenomic databases

    eggNOGi COG3091.
    HOGENOMi HOG000281171.
    KOi K02742.
    OMAi PHEVAHL.
    OrthoDBi EOG661H7V.

    Enzyme and pathway databases

    BioCyci EcoCyc:EG12122-MONOMER.
    ECOL316407:JW2911-MONOMER.

    Miscellaneous databases

    PROi P39902.

    Gene expression databases

    Genevestigatori P39902.

    Family and domain databases

    HAMAPi MF_00746. SprT.
    InterProi IPR006640. SprT-like_domain.
    IPR023483. Uncharacterised_SprT.
    [Graphical view ]
    Pfami PF10263. SprT-like. 1 hit.
    [Graphical view ]
    SMARTi SM00731. SprT. 1 hit.
    [Graphical view ]
    PROSITEi PS00142. ZINC_PROTEASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A newly identified gene sprT which is involved in bolA gene expression."
      Utsumi R., Suzuki T.
      Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. Roberts P.E.
      Thesis (1992), University of Cambridge, United Kingdom
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / MG1655 / ATCC 47076.
    4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
      Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
      Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
    5. "Location of the endA gene coding for endonuclease I on the physical map of the Escherichia coli K-12 chromosome."
      Jekel M., Wackernagel W.
      J. Bacteriol. 176:1550-1551(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 70-165.
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
    6. "Intrinsic and extrinsic approaches for detecting genes in a bacterial genome."
      Borodovsky M., Rudd K.E., Koonin E.V.
      Nucleic Acids Res. 22:4756-4767(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiSPRT_ECOLI
    AccessioniPrimary (citable) accession number: P39902
    Secondary accession number(s): Q2M9P9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: February 1, 1995
    Last modified: October 1, 2014
    This is version 100 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Escherichia coli
      Escherichia coli (strain K12): entries and cross-references to EcoGene
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3