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P39902

- SPRT_ECOLI

UniProt

P39902 - SPRT_ECOLI

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Protein

Protein SprT

Gene

sprT

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Involved in bolA gene expression at the stationary phase.

Cofactori

Binds 1 zinc ion.Curated

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi78 – 781ZincSequence Analysis
Active sitei79 – 791Sequence Analysis
Metal bindingi82 – 821ZincSequence Analysis

GO - Molecular functioni

  1. zinc ion binding Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Enzyme and pathway databases

BioCyciEcoCyc:EG12122-MONOMER.
ECOL316407:JW2911-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein SprT
Gene namesi
Name:sprT
Synonyms:yggI
Ordered Locus Names:b2944, JW2911
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

Organism-specific databases

EcoGeneiEG12122. sprT.

Subcellular locationi

Cytoplasm Curated

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 165165Protein SprTPRO_0000213266Add
BLAST

Proteomic databases

PaxDbiP39902.
PRIDEiP39902.

Expressioni

Gene expression databases

GenevestigatoriP39902.

Interactioni

Protein-protein interaction databases

IntActiP39902. 7 interactions.
STRINGi511145.b2944.

Structurei

3D structure databases

ProteinModelPortaliP39902.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini20 – 163144SprT-likeAdd
BLAST

Sequence similaritiesi

Belongs to the SprT family.Curated
Contains 1 SprT-like domain.Curated

Phylogenomic databases

eggNOGiCOG3091.
HOGENOMiHOG000281171.
InParanoidiP39902.
KOiK02742.
OMAiPHEVAHL.
OrthoDBiEOG661H7V.

Family and domain databases

HAMAPiMF_00746. SprT.
InterProiIPR006640. SprT-like_domain.
IPR023483. Uncharacterised_SprT.
[Graphical view]
PfamiPF10263. SprT-like. 1 hit.
[Graphical view]
SMARTiSM00731. SprT. 1 hit.
[Graphical view]
PROSITEiPS00142. ZINC_PROTEASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P39902 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKTSRLPIAI QQAVMRRLRE KLAQANLKLG RNYPEPKLSY TQRGTSAGTA
60 70 80 90 100
WLESYEIRLN PVLLLENSEA FIEEVVPHEL AHLLVWKHFG RVAPHGKEWK
110 120 130 140 150
WMMENVLGVP ARRTHQFELQ SVRRNTFPYR CKCQEHQLTV RRHNRVVRGE
160
AVYRCVHCGE QLVAK
Length:165
Mass (Da):19,348
Last modified:February 1, 1995 - v1
Checksum:iF5E4A3992DD091B4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D83644 Genomic DNA. Translation: BAA12021.1.
U28377 Genomic DNA. Translation: AAA69111.1.
U00096 Genomic DNA. Translation: AAC75981.1.
AP009048 Genomic DNA. Translation: BAE77007.1.
X65169 Genomic DNA. No translation available.
PIRiG65079.
RefSeqiNP_417419.1. NC_000913.3.
YP_491143.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiAAC75981; AAC75981; b2944.
BAE77007; BAE77007; BAE77007.
GeneIDi12930537.
947443.
KEGGiecj:Y75_p2874.
eco:b2944.
PATRICi32121298. VBIEscCol129921_3037.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D83644 Genomic DNA. Translation: BAA12021.1 .
U28377 Genomic DNA. Translation: AAA69111.1 .
U00096 Genomic DNA. Translation: AAC75981.1 .
AP009048 Genomic DNA. Translation: BAE77007.1 .
X65169 Genomic DNA. No translation available.
PIRi G65079.
RefSeqi NP_417419.1. NC_000913.3.
YP_491143.1. NC_007779.1.

3D structure databases

ProteinModelPortali P39902.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P39902. 7 interactions.
STRINGi 511145.b2944.

Proteomic databases

PaxDbi P39902.
PRIDEi P39902.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAC75981 ; AAC75981 ; b2944 .
BAE77007 ; BAE77007 ; BAE77007 .
GeneIDi 12930537.
947443.
KEGGi ecj:Y75_p2874.
eco:b2944.
PATRICi 32121298. VBIEscCol129921_3037.

Organism-specific databases

EchoBASEi EB2043.
EcoGenei EG12122. sprT.

Phylogenomic databases

eggNOGi COG3091.
HOGENOMi HOG000281171.
InParanoidi P39902.
KOi K02742.
OMAi PHEVAHL.
OrthoDBi EOG661H7V.

Enzyme and pathway databases

BioCyci EcoCyc:EG12122-MONOMER.
ECOL316407:JW2911-MONOMER.

Miscellaneous databases

PROi P39902.

Gene expression databases

Genevestigatori P39902.

Family and domain databases

HAMAPi MF_00746. SprT.
InterProi IPR006640. SprT-like_domain.
IPR023483. Uncharacterised_SprT.
[Graphical view ]
Pfami PF10263. SprT-like. 1 hit.
[Graphical view ]
SMARTi SM00731. SprT. 1 hit.
[Graphical view ]
PROSITEi PS00142. ZINC_PROTEASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A newly identified gene sprT which is involved in bolA gene expression."
    Utsumi R., Suzuki T.
    Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Roberts P.E.
    Thesis (1992), University of Cambridge, United Kingdom
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  5. "Location of the endA gene coding for endonuclease I on the physical map of the Escherichia coli K-12 chromosome."
    Jekel M., Wackernagel W.
    J. Bacteriol. 176:1550-1551(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 70-165.
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  6. "Intrinsic and extrinsic approaches for detecting genes in a bacterial genome."
    Borodovsky M., Rudd K.E., Koonin E.V.
    Nucleic Acids Res. 22:4756-4767(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiSPRT_ECOLI
AccessioniPrimary (citable) accession number: P39902
Secondary accession number(s): Q2M9P9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: October 29, 2014
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3