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P39902 (SPRT_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 99. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein SprT
Gene names
Name:sprT
Synonyms:yggI
Ordered Locus Names:b2944, JW2911
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length165 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in bolA gene expression at the stationary phase. HAMAP-Rule MF_00746

Cofactor

Binds 1 zinc ion Potential.

Subcellular location

Cytoplasm Potential HAMAP-Rule MF_00746.

Sequence similarities

Belongs to the SprT family.

Contains 1 SprT-like domain.

Ontologies

Keywords
   Cellular componentCytoplasm
   LigandMetal-binding
Zinc
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionzinc ion binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 165165Protein SprT HAMAP-Rule MF_00746
PRO_0000213266

Regions

Domain20 – 163144SprT-like

Sites

Active site791 Potential
Metal binding781Zinc Potential
Metal binding821Zinc Potential

Sequences

Sequence LengthMass (Da)Tools
P39902 [UniParc].

Last modified February 1, 1995. Version 1.
Checksum: F5E4A3992DD091B4

FASTA16519,348
        10         20         30         40         50         60 
MKTSRLPIAI QQAVMRRLRE KLAQANLKLG RNYPEPKLSY TQRGTSAGTA WLESYEIRLN 

        70         80         90        100        110        120 
PVLLLENSEA FIEEVVPHEL AHLLVWKHFG RVAPHGKEWK WMMENVLGVP ARRTHQFELQ 

       130        140        150        160 
SVRRNTFPYR CKCQEHQLTV RRHNRVVRGE AVYRCVHCGE QLVAK 

« Hide

References

« Hide 'large scale' references
[1]"A newly identified gene sprT which is involved in bolA gene expression."
Utsumi R., Suzuki T.
Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]Roberts P.E.
Thesis (1992), University of Cambridge, United Kingdom
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[3]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[4]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[5]"Location of the endA gene coding for endonuclease I on the physical map of the Escherichia coli K-12 chromosome."
Jekel M., Wackernagel W.
J. Bacteriol. 176:1550-1551(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 70-165.
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[6]"Intrinsic and extrinsic approaches for detecting genes in a bacterial genome."
Borodovsky M., Rudd K.E., Koonin E.V.
Nucleic Acids Res. 22:4756-4767(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D83644 Genomic DNA. Translation: BAA12021.1.
U28377 Genomic DNA. Translation: AAA69111.1.
U00096 Genomic DNA. Translation: AAC75981.1.
AP009048 Genomic DNA. Translation: BAE77007.1.
X65169 Genomic DNA. No translation available.
PIRG65079.
RefSeqNP_417419.1. NC_000913.3.
YP_491143.1. NC_007779.1.

3D structure databases

ProteinModelPortalP39902.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP39902. 7 interactions.
STRING511145.b2944.

Proteomic databases

PaxDbP39902.
PRIDEP39902.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC75981; AAC75981; b2944.
BAE77007; BAE77007; BAE77007.
GeneID12930537.
947443.
KEGGecj:Y75_p2874.
eco:b2944.
PATRIC32121298. VBIEscCol129921_3037.

Organism-specific databases

EchoBASEEB2043.
EcoGeneEG12122. sprT.

Phylogenomic databases

eggNOGCOG3091.
HOGENOMHOG000281171.
KOK02742.
OMAPHEVAHL.
OrthoDBEOG661H7V.

Enzyme and pathway databases

BioCycEcoCyc:EG12122-MONOMER.
ECOL316407:JW2911-MONOMER.

Gene expression databases

GenevestigatorP39902.

Family and domain databases

HAMAPMF_00746. SprT.
InterProIPR006640. SprT-like_domain.
IPR023483. Uncharacterised_SprT.
[Graphical view]
PfamPF10263. SprT-like. 1 hit.
[Graphical view]
SMARTSM00731. SprT. 1 hit.
[Graphical view]
PROSITEPS00142. ZINC_PROTEASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROP39902.

Entry information

Entry nameSPRT_ECOLI
AccessionPrimary (citable) accession number: P39902
Secondary accession number(s): Q2M9P9
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: May 14, 2014
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene