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Protein

Uncharacterized protein YfeH

Gene

yfeH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG12376-MONOMER.
ECOL316407:JW5876-MONOMER.
RETL1328306-WGS:GSTH-3638-MONOMER.

Protein family/group databases

TCDBi2.A.28.3.4. the bile acid:na(+) symporter (bass) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfeH
Gene namesi
Name:yfeH
Ordered Locus Names:b2410, JW5876
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12376. yfeH.

Subcellular locationi

GO - Cellular componenti

  • plasma membrane Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 332332Uncharacterized protein YfeHPRO_0000169221Add
BLAST

Proteomic databases

PaxDbiP39836.
PRIDEiP39836.

Interactioni

Protein-protein interaction databases

BioGridi4259668. 224 interactions.
STRINGi511145.b2410.

Structurei

3D structure databases

ProteinModelPortaliP39836.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105DHU. Bacteria.
COG0385. LUCA.
HOGENOMiHOG000265419.
InParanoidiP39836.
KOiK14347.
OMAiNTYMARW.
OrthoDBiEOG6DNT7V.
PhylomeDBiP39836.

Family and domain databases

InterProiIPR016833. Put_Na-Bile_cotransptr.
[Graphical view]
PANTHERiPTHR18640. PTHR18640. 1 hit.
PfamiPF13593. SBF_like. 1 hit.
[Graphical view]
PIRSFiPIRSF026166. UCP026166. 1 hit.

Sequencei

Sequence statusi: Complete.

P39836-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLFRILDPF TLTLITVVLL ASFFPARGDF VPFFENLTTA AIALLFFMHG
60 70 80 90 100
AKLSREAIIA GGGHWRLHLW VMCSTFVLFP ILGVLFAWWK PVNVDPMLYS
110 120 130 140 150
GFLYLCILPA TVQSAIAFTS MAGGNVAAAV CSASASSLLG IFLSPLLVGL
160 170 180 190 200
VMNVHGAGGS LEQVGKIMLQ LLLPFVLGHL SRPWIGDWVS RNKKWIAKTD
210 220 230 240 250
QTSILLVVYT AFSEAVVNGI WHKVGWGSLL FIVVVSCVLL AIVIVVNVFM
260 270 280 290 300
ARRLSFNKAD EITIVFCGSK KSLANGIPMA NILFPTSVIG MMVLPLMIFH
310 320 330
QIQLMVCAVL ARRYKRQTEQ LQAQQESSAD KA
Length:332
Mass (Da):36,406
Last modified:November 1, 1997 - v2
Checksum:iB8C96697C5BC3CF1
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti325 – 3328QESSADKA → RKAAPIKLKADASGAGPVAS APRF (Ref. 4) Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75463.1.
AP009048 Genomic DNA. Translation: BAA16281.2.
M24278 Genomic DNA. No translation available.
PIRiA65015.
RefSeqiNP_416905.1. NC_000913.3.
WP_000765610.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75463; AAC75463; b2410.
BAA16281; BAA16281; BAA16281.
GeneIDi946874.
KEGGiecj:JW5876.
eco:b2410.
PATRICi32120201. VBIEscCol129921_2503.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75463.1.
AP009048 Genomic DNA. Translation: BAA16281.2.
M24278 Genomic DNA. No translation available.
PIRiA65015.
RefSeqiNP_416905.1. NC_000913.3.
WP_000765610.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP39836.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259668. 224 interactions.
STRINGi511145.b2410.

Protein family/group databases

TCDBi2.A.28.3.4. the bile acid:na(+) symporter (bass) family.

Proteomic databases

PaxDbiP39836.
PRIDEiP39836.

Protocols and materials databases

DNASUi946874.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75463; AAC75463; b2410.
BAA16281; BAA16281; BAA16281.
GeneIDi946874.
KEGGiecj:JW5876.
eco:b2410.
PATRICi32120201. VBIEscCol129921_2503.

Organism-specific databases

EchoBASEiEB2279.
EcoGeneiEG12376. yfeH.

Phylogenomic databases

eggNOGiENOG4105DHU. Bacteria.
COG0385. LUCA.
HOGENOMiHOG000265419.
InParanoidiP39836.
KOiK14347.
OMAiNTYMARW.
OrthoDBiEOG6DNT7V.
PhylomeDBiP39836.

Enzyme and pathway databases

BioCyciEcoCyc:EG12376-MONOMER.
ECOL316407:JW5876-MONOMER.
RETL1328306-WGS:GSTH-3638-MONOMER.

Miscellaneous databases

PROiP39836.

Family and domain databases

InterProiIPR016833. Put_Na-Bile_cotransptr.
[Graphical view]
PANTHERiPTHR18640. PTHR18640. 1 hit.
PfamiPF13593. SBF_like. 1 hit.
[Graphical view]
PIRSFiPIRSF026166. UCP026166. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features."
    Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T., Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K., Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T.
    , Oyama S., Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H., Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.
    DNA Res. 4:91-113(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. O'Connor M.J., Ally A., Ally D., Zhang X., Robichaud M., Backman K.
    Submitted (APR-1989) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 94-332.
  5. "Intrinsic and extrinsic approaches for detecting genes in a bacterial genome."
    Borodovsky M., Rudd K.E., Koonin E.V.
    Nucleic Acids Res. 22:4756-4767(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiYFEH_ECOLI
AccessioniPrimary (citable) accession number: P39836
Secondary accession number(s): P76532, P76958
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: November 1, 1997
Last modified: March 16, 2016
This is version 108 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.