Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Transcription antiterminator LicT

Gene

licT

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Mediates positive regulation of the glucanase operon (licST) by functioning as an antiterminator factor of transcription. Prevents termination at terminator lic-t.

GO - Molecular functioni

GO - Biological processi

  • positive regulation of transcription, DNA-templated Source: CACAO
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionActivator, RNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU39080-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription antiterminator LicT
Gene namesi
Name:licT
Ordered Locus Names:BSU39080
ORF Names:N15A
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002042471 – 277Transcription antiterminator LicTAdd BLAST277

Post-translational modificationi

Phosphorylated.By similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiP39805
PRIDEiP39805

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100021096

Structurei

Secondary structure

1277
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi3 – 8Combined sources6
Beta strandi11 – 15Combined sources5
Beta strandi21 – 25Combined sources5
Beta strandi27 – 30Combined sources4
Helixi41 – 43Combined sources3
Beta strandi45 – 51Combined sources7
Helixi57 – 59Combined sources3
Helixi63 – 65Combined sources3
Helixi68 – 85Combined sources18
Helixi92 – 109Combined sources18
Helixi119 – 125Combined sources7
Helixi127 – 144Combined sources18
Helixi150 – 164Combined sources15
Helixi170 – 190Combined sources21
Helixi199 – 217Combined sources19
Helixi227 – 235Combined sources9
Helixi237 – 254Combined sources18
Helixi260 – 274Combined sources15

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1H99X-ray1.55A57-277[»]
1L1CNMR-A/B1-55[»]
1TLVX-ray1.95A57-274[»]
ProteinModelPortaliP39805
SMRiP39805
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP39805

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini65 – 170PRD 1PROSITE-ProRule annotationAdd BLAST106
Domaini171 – 277PRD 2PROSITE-ProRule annotationAdd BLAST107

Sequence similaritiesi

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG4105CID Bacteria
COG3711 LUCA
HOGENOMiHOG000223756
InParanoidiP39805
KOiK03488
OMAiYPDEYAI
PhylomeDBiP39805

Family and domain databases

Gene3Di2.30.24.10, 1 hit
InterProiView protein in InterPro
IPR004341 CAT_RNA-bd_dom
IPR036650 CAT_RNA-bd_dom_sf
IPR011608 PRD
IPR036634 PRD_sf
IPR001550 Transcrpt_antitermin_CS
PfamiView protein in Pfam
PF03123 CAT_RBD, 1 hit
PF00874 PRD, 2 hits
SMARTiView protein in SMART
SM01061 CAT_RBD, 1 hit
SUPFAMiSSF50151 SSF50151, 1 hit
SSF63520 SSF63520, 2 hits
PROSITEiView protein in PROSITE
PS00654 PRD_1, 1 hit
PS51372 PRD_2, 2 hits

Sequencei

Sequence statusi: Complete.

P39805-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIAKVINNN VISVVNEQGK ELVVMGRGLA FQKKSGDDVD EARIEKVFTL
60 70 80 90 100
DNKDVSEKFK TLLYDIPIEC MEVSEEIISY AKLQLGKKLN DSIYVSLTDH
110 120 130 140 150
INFAIQRNQK GLDIKNALLW ETKRLYKDEF AIGKEALVMV KNKTGVSLPE
160 170 180 190 200
DEAGFIALHI VNAELNEEMP NIINITKVMQ EILSIVKYHF KIEFNEESLH
210 220 230 240 250
YYRFVTHLKF FAQRLFNGTH MESQDDFLLD TVKEKYHRAY ECTKKIQTYI
260 270
EREYEHKLTS DELLYLTIHI ERVVKQA
Length:277
Mass (Da):32,317
Last modified:February 1, 1995 - v1
Checksum:iE494702FD9B4C4A4
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti79S → H in BAA11696 (PubMed:8969509).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z28340 Genomic DNA Translation: CAA82194.1
D83026 Genomic DNA Translation: BAA11696.1
AL009126 Genomic DNA Translation: CAB15944.2
X00754 Genomic DNA Translation: CAA25326.1
PIRiS47216
RefSeqiNP_391787.2, NC_000964.3
WP_003242598.1, NZ_JNCM01000034.1

Genome annotation databases

EnsemblBacteriaiCAB15944; CAB15944; BSU39080
GeneIDi937503
KEGGibsu:BSU39080
PATRICifig|224308.179.peg.4231

Similar proteinsi

Entry informationi

Entry nameiLICT_BACSU
AccessioniPrimary (citable) accession number: P39805
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: March 28, 2018
This is version 123 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health