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Protein

Shuttling pre-60S factor ECM1

Gene

ECM1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Pre-ribosomal factor involved in 60S ribosomal protein subunit export from the nucleus.2 Publications

Miscellaneous

Present with 2840 molecules/cell in log phase SD medium.1 Publication

GO - Biological processi

  • ribosomal large subunit export from nucleus Source: SGD

Keywordsi

Biological processRibosome biogenesis, Transport

Enzyme and pathway databases

BioCyciYEAST:G3O-28862-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Shuttling pre-60S factor ECM1
Alternative name(s):
Extracellular mutant protein 1
Protein SIM1
Gene namesi
Name:ECM1
Synonyms:SIM1
Ordered Locus Names:YAL059W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:YAL059W
SGDiS000000055 ECM1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000869161 – 212Shuttling pre-60S factor ECM1Add BLAST212

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei188PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiP39715
PaxDbiP39715
PRIDEiP39715

PTM databases

iPTMnetiP39715

Interactioni

Subunit structurei

Associates with the pre-60S ribosomal particle and the nucleopore complex.

Protein-protein interaction databases

BioGridi31771119 interactors.
DIPiDIP-2465N
IntActiP39715 25 interactors.
MINTiP39715
STRINGi4932.YAL059W

Family & Domainsi

Sequence similaritiesi

Belongs to the ECM1 family.Curated

Phylogenomic databases

HOGENOMiHOG000094086
InParanoidiP39715
OMAiYVQSARK
OrthoDBiEOG092C5ABM

Family and domain databases

InterProiView protein in InterPro
IPR022784 Ribosome_bgen_Alb1
PfamiView protein in Pfam
PF09135 Alb1, 1 hit

Sequencei

Sequence statusi: Complete.

P39715-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWEQRRQKVV FSLTILVRYR LKQSMAKKIS KNSRAARQSD ALEPEVKDLS
60 70 80 90 100
ELPRAEKTDL TNILIRTAAK NEALLEAKIS KKANKSKRGK KLNKKALEDK
110 120 130 140 150
LANSISSMDR DRLVKALNFT NRLDGKIAKS ISRAKYIQNT RKAGWDSTNE
160 170 180 190 200
TIKKELAFLN GGLSVQAKSA SEGNAEKEDE EIPEVFDSLA EDNTVQKTPT
210
NRFGVLPDDV EE
Length:212
Mass (Da):23,891
Last modified:July 27, 2011 - v2
Checksum:iACFFE6CFF6F62CD5
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti102A → D in AAC04975 (PubMed:7731988).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U12980 Genomic DNA Translation: AAC04975.1
AY558168 Genomic DNA Translation: AAS56494.1
BK006935 Genomic DNA Translation: DAA06930.2
PIRiS51963
RefSeqiNP_009342.2, NM_001178201.2

Genome annotation databases

EnsemblFungiiYAL059W; YAL059W; YAL059W
GeneIDi851240
KEGGisce:YAL059W

Similar proteinsi

Entry informationi

Entry nameiECM1_YEAST
AccessioniPrimary (citable) accession number: P39715
Secondary accession number(s): D6VPG0, E9P8V4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: July 27, 2011
Last modified: March 28, 2018
This is version 127 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome