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Protein

Probable transporter SEO1

Gene

SEO1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Not known; suppressor of sulfoxide ethionine resistance.

GO - Molecular functioni

  • transmembrane transporter activity Source: GO_Central
  • transporter activity Source: SGD

GO - Biological processi

  • anion transport Source: GO_Central
  • transmembrane transport Source: GO_Central
  • transport Source: SGD
Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciYEAST:G3O-28866-MONOMER.

Protein family/group databases

TCDBi2.A.1.14.37. the major facilitator superfamily (mfs).

Names & Taxonomyi

Protein namesi
Recommended name:
Probable transporter SEO1
Gene namesi
Name:SEO1
Ordered Locus Names:YAL067C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:YAL067C.
SGDiS000000062. SEO1.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 130CytoplasmicSequence analysisAdd BLAST130
Transmembranei131 – 151HelicalSequence analysisAdd BLAST21
Topological domaini152 – 175ExtracellularSequence analysisAdd BLAST24
Transmembranei176 – 196HelicalSequence analysisAdd BLAST21
Topological domaini197 – 200CytoplasmicSequence analysis4
Transmembranei201 – 221HelicalSequence analysisAdd BLAST21
Topological domaini222 – 234ExtracellularSequence analysisAdd BLAST13
Transmembranei235 – 255HelicalSequence analysisAdd BLAST21
Topological domaini256 – 265CytoplasmicSequence analysis10
Transmembranei266 – 286HelicalSequence analysisAdd BLAST21
Topological domaini287 – 302ExtracellularSequence analysisAdd BLAST16
Transmembranei303 – 323HelicalSequence analysisAdd BLAST21
Topological domaini324 – 363CytoplasmicSequence analysisAdd BLAST40
Transmembranei364 – 384HelicalSequence analysisAdd BLAST21
Topological domaini385 – 411ExtracellularSequence analysisAdd BLAST27
Transmembranei412 – 432HelicalSequence analysisAdd BLAST21
Topological domaini433 – 438CytoplasmicSequence analysis6
Transmembranei439 – 459HelicalSequence analysisAdd BLAST21
Topological domaini460 – 466ExtracellularSequence analysis7
Transmembranei467 – 487HelicalSequence analysisAdd BLAST21
Topological domaini488 – 499CytoplasmicSequence analysisAdd BLAST12
Transmembranei500 – 520HelicalSequence analysisAdd BLAST21
Topological domaini521 – 532ExtracellularSequence analysisAdd BLAST12
Transmembranei533 – 553HelicalSequence analysisAdd BLAST21
Topological domaini554 – 593CytoplasmicSequence analysisAdd BLAST40

GO - Cellular componenti

  • integral component of membrane Source: GO_Central
  • membrane Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001213681 – 593Probable transporter SEO1Add BLAST593

Proteomic databases

PRIDEiP39709.

PTM databases

iPTMnetiP39709.

Interactioni

Protein-protein interaction databases

BioGridi31762. 13 interactors.
DIPiDIP-8291N.
IntActiP39709. 1 interactor.
MINTiMINT-1354581.

Structurei

3D structure databases

ProteinModelPortaliP39709.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

GeneTreeiENSGT00620000088258.
HOGENOMiHOG000179304.
InParanoidiP39709.
OMAiWKFWALL.
OrthoDBiEOG092C2VR3.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.

Sequencei

Sequence statusi: Complete.

P39709-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYSIVKEIIV DPYKRLKWGF IPVKRQVEDL PDDLNSTEIV TISNSIQSHE
60 70 80 90 100
TAENFITTTS EKDQLHFETS SYSEHKDNVN VTRSYEYRDE ADRPWWRFFD
110 120 130 140 150
EQEYRINEKE RSHNKWYSWF KQGTSFKEKK LLIKLDVLLA FYSCIAYWVK
160 170 180 190 200
YLDTVNINNA YVSGMKEDLG FQGNDLVHTQ VMYTVGNIIF QLPFLIYLNK
210 220 230 240 250
LPLNYVLPSL DLCWSLLTVG AAYVNSVPHL KAIRFFIGAF EAPSYLAYQY
260 270 280 290 300
LFGSFYKHDE MVRRSAFYYL GQYIGILSAG GIQSAVYSSL NGVNGLEGWR
310 320 330 340 350
WNFIIDAIVS VVVGLIGFYS LPGDPYNCYS IFLTDDEIRL ARKRLKENQT
360 370 380 390 400
GKSDFETKVF DIKLWKTIFS DWKIYILTLW NIFCWNDSNV SSGAYLLWLK
410 420 430 440 450
SLKRYSIPKL NQLSMITPGL GMVYLMLTGI IADKLHSRWF AIIFTQVFNI
460 470 480 490 500
IGNSILAAWD VAEGAKWFAF MLQCFGWAMA PVLYSWQNDI CRRDAQTRAI
510 520 530 540 550
TLVTMNIMAQ SSTAWISVLV WKTEEAPRYL KGFTFTACSA FCLSIWTFVV
560 570 580 590
LYFYKRDERN NAKKNGIVLY NSKHGVEKPT SKDVETLSVS DEK
Length:593
Mass (Da):68,842
Last modified:February 1, 1995 - v1
Checksum:i6B7B1A2A7D5EAA44
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U12980 Genomic DNA. Translation: AAC04968.1.
BK006935 Genomic DNA. Translation: DAA06920.1.
PIRiS51956.
RefSeqiNP_009333.1. NM_001178208.1.

Genome annotation databases

EnsemblFungiiYAL067C; YAL067C; YAL067C.
GeneIDi851230.
KEGGisce:YAL067C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U12980 Genomic DNA. Translation: AAC04968.1.
BK006935 Genomic DNA. Translation: DAA06920.1.
PIRiS51956.
RefSeqiNP_009333.1. NM_001178208.1.

3D structure databases

ProteinModelPortaliP39709.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi31762. 13 interactors.
DIPiDIP-8291N.
IntActiP39709. 1 interactor.
MINTiMINT-1354581.

Protein family/group databases

TCDBi2.A.1.14.37. the major facilitator superfamily (mfs).

PTM databases

iPTMnetiP39709.

Proteomic databases

PRIDEiP39709.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYAL067C; YAL067C; YAL067C.
GeneIDi851230.
KEGGisce:YAL067C.

Organism-specific databases

EuPathDBiFungiDB:YAL067C.
SGDiS000000062. SEO1.

Phylogenomic databases

GeneTreeiENSGT00620000088258.
HOGENOMiHOG000179304.
InParanoidiP39709.
OMAiWKFWALL.
OrthoDBiEOG092C2VR3.

Enzyme and pathway databases

BioCyciYEAST:G3O-28866-MONOMER.

Miscellaneous databases

PROiP39709.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiSEO1_YEAST
AccessioniPrimary (citable) accession number: P39709
Secondary accession number(s): D6VPF0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: November 2, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome I
    Yeast (Saccharomyces cerevisiae) chromosome I: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.