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Protein

Putative uncharacterized protein YAL004W

Gene

YAL004W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YAL004W
Gene namesi
Ordered Locus Names:YAL004W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome I

Organism-specific databases

SGDiS000002136. YAL004W.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 215215Putative uncharacterized protein YAL004WPRO_0000202411Add
BLAST

Expressioni

Gene expression databases

GenevestigatoriP39703.

Interactioni

Protein-protein interaction databases

DIPiDIP-2750N.
IntActiP39703. 2 interactions.
MINTiMINT-584296.
STRINGi4932.YAL004W.

Structurei

3D structure databases

ProteinModelPortaliP39703.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG75101.
GeneTreeiENSGT00690000102580.
InParanoidiP39703.
OrthoDBiEOG7C5MM8.

Family and domain databases

InterProiIPR019651. Glutamate_DH_NAD-spec.
[Graphical view]
PfamiPF10712. NAD-GH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P39703-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGVTSGGLNF KDTVFNGQQR DIESTTTQVE NQDVFFLTLL VQTVSNGSGG
60 70 80 90 100
RFVNNTQDIQ TSNGTSILGS LSLRIVEVSW DSDDSVIDLG SQVRFGSFLH
110 120 130 140 150
LTQDHGGDLF WGKVLGFTLK FNLNLRLTVN IDQLEWEVLH VSLHFWVVEV
160 170 180 190 200
STDQTLSVEN GIRRIHSSLI LSSITNQSFS VSESDKRWSG SVTLIVGNNV
210
HTIISKVSNT RVCCT
Length:215
Mass (Da):23,740
Last modified:September 11, 2007 - v2
Checksum:i5E8EFB13CC2EE286
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti17 – 171G → E in AAC04953 (PubMed:7731988).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X12926 Genomic DNA. No translation available.
L22015 Genomic DNA. Translation: AAC04953.1.
BK006935 Genomic DNA. No translation available.
PIRiS43450.

Genome annotation databases

EnsemblFungiiYAL004W; YAL004W; YAL004W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X12926 Genomic DNA. No translation available.
L22015 Genomic DNA. Translation: AAC04953.1.
BK006935 Genomic DNA. No translation available.
PIRiS43450.

3D structure databases

ProteinModelPortaliP39703.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-2750N.
IntActiP39703. 2 interactions.
MINTiMINT-584296.
STRINGi4932.YAL004W.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYAL004W; YAL004W; YAL004W.

Organism-specific databases

SGDiS000002136. YAL004W.

Phylogenomic databases

eggNOGiNOG75101.
GeneTreeiENSGT00690000102580.
InParanoidiP39703.
OrthoDBiEOG7C5MM8.

Gene expression databases

GenevestigatoriP39703.

Family and domain databases

InterProiIPR019651. Glutamate_DH_NAD-spec.
[Graphical view]
PfamiPF10712. NAD-GH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The SSA1 and SSA2 genes of the yeast Saccharomyces cerevisiae."
    Slater M.R., Craig E.A.
    Nucleic Acids Res. 17:805-806(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Slater M.R.
    Submitted (JUN-1993) to the EMBL/GenBank/DDBJ databases
    Cited for: SEQUENCE REVISION TO 17.
  3. "Sequencing of chromosome I of Saccharomyces cerevisiae: analysis of the 42 kbp SPO7-CENI-CDC15 region."
    Clark M.W., Keng T., Storms R.K., Zhong W.-W., Fortin N., Zeng B., Delaney S., Ouellette B.F.F., Barton A.B., Kaback D.B., Bussey H.
    Yeast 10:535-541(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204511 / S288c / AB972.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  5. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.

Entry informationi

Entry nameiYAA4_YEAST
AccessioniPrimary (citable) accession number: P39703
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: September 11, 2007
Last modified: January 7, 2015
This is version 76 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Caution

Product of a dubious gene prediction. Completely overlaps SSA1.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome I
    Yeast (Saccharomyces cerevisiae) chromosome I: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.