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Protein

Glucose-1-phosphate adenylyltransferase

Gene

glgC

Organism
Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans.By similarity

Catalytic activityi

ATP + alpha-D-glucose 1-phosphate = diphosphate + ADP-glucose.

Pathwayi: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Nucleotidyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BRENDAi2.7.7.27. 200.
UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
Glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Alternative name(s):
ADP-glucose pyrophosphorylase
Short name:
ADPGlc PPase
ADP-glucose synthase
Gene namesi
Name:glgC
OrganismiRhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)
Taxonomic identifieri358 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 420420Glucose-1-phosphate adenylyltransferasePRO_0000195272Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi1050720.Agau_L100945.

Structurei

Secondary structure

1
420
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi9 – 124Combined sources
Beta strandi13 – 197Combined sources
Helixi24 – 307Combined sources
Beta strandi31 – 333Combined sources
Helixi35 – 373Combined sources
Beta strandi38 – 403Combined sources
Turni41 – 433Combined sources
Helixi48 – 569Combined sources
Beta strandi61 – 666Combined sources
Helixi71 – 8010Combined sources
Helixi86 – 883Combined sources
Beta strandi91 – 955Combined sources
Helixi110 – 1156Combined sources
Helixi118 – 1247Combined sources
Beta strandi127 – 1359Combined sources
Helixi143 – 1519Combined sources
Beta strandi155 – 16410Combined sources
Helixi167 – 1704Combined sources
Beta strandi171 – 1766Combined sources
Beta strandi180 – 1889Combined sources
Beta strandi201 – 21212Combined sources
Helixi213 – 2208Combined sources
Helixi240 – 2445Combined sources
Beta strandi247 – 2515Combined sources
Helixi252 – 2554Combined sources
Helixi273 – 28210Combined sources
Beta strandi285 – 2873Combined sources
Beta strandi310 – 3123Combined sources
Beta strandi321 – 3244Combined sources
Beta strandi332 – 3354Combined sources
Beta strandi337 – 3404Combined sources
Beta strandi354 – 3607Combined sources
Beta strandi371 – 3777Combined sources
Beta strandi388 – 3914Combined sources
Helixi393 – 3997Combined sources
Beta strandi400 – 4023Combined sources
Beta strandi408 – 4103Combined sources
Helixi412 – 4165Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3BRKX-ray2.10X1-420[»]
ProteinModelPortaliP39669.
SMRiP39669. Positions 7-418.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP39669.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4107QQ4. Bacteria.
COG0448. LUCA.

Family and domain databases

Gene3Di3.90.550.10. 2 hits.
HAMAPiMF_00624. GlgC. 1 hit.
InterProiIPR005836. ADP_Glu_pyroP_CS.
IPR011831. GlgC.
IPR023049. GlgC_bac.
IPR005835. NTP_transferase_dom.
IPR029044. Nucleotide-diphossugar_trans.
IPR011004. Trimer_LpxA-like.
[Graphical view]
PfamiPF00483. NTP_transferase. 1 hit.
[Graphical view]
SUPFAMiSSF51161. SSF51161. 1 hit.
SSF53448. SSF53448. 2 hits.
TIGRFAMsiTIGR02091. glgC. 1 hit.
PROSITEiPS00808. ADP_GLC_PYROPHOSPH_1. 1 hit.
PS00809. ADP_GLC_PYROPHOSPH_2. 1 hit.
PS00810. ADP_GLC_PYROPHOSPH_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P39669-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEKRVQPLA RDAMAYVLAG GRGSRLKELT DRRAKPAVYF GGKARIIDFA
60 70 80 90 100
LSNALNSGIR RIGVATQYKA HSLIRHLQRG WDFFRPERNE SFDILPASQR
110 120 130 140 150
VSETQWYEGT ADAVYQNIDI IEPYAPEYMV ILAGDHIYKM DYEYMLQQHV
160 170 180 190 200
DSGADVTIGC LEVPRMEATG FGVMHVNEKD EIIDFIEKPA DPPGIPGNEG
210 220 230 240 250
FALASMGIYV FHTKFLMEAV RRDAADPTSS RDFGKDIIPY IVEHGKAVAH
260 270 280 290 300
RFADSCVRSD FEHEPYWRDV GTIDAYWQAN IDLTDVVPDL DIYDKSWPIW
310 320 330 340 350
TYAEITPPAK FVHDDEDRRG SAVSSVVSGD CIISGAALNR SLLFTGVRAN
360 370 380 390 400
SYSRLENAVV LPSVKIGRHA QLSNVVIDHG VVIPEGLIVG EDPELDAKRF
410 420
RRTESGICLI TQSMIDKLDL
Length:420
Mass (Da):47,029
Last modified:February 1, 1995 - v1
Checksum:iF93F5E4E5996E698
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF033856 Genomic DNA. Translation: AAD03473.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF033856 Genomic DNA. Translation: AAD03473.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3BRKX-ray2.10X1-420[»]
ProteinModelPortaliP39669.
SMRiP39669. Positions 7-418.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1050720.Agau_L100945.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4107QQ4. Bacteria.
COG0448. LUCA.

Enzyme and pathway databases

UniPathwayiUPA00164.
BRENDAi2.7.7.27. 200.

Miscellaneous databases

EvolutionaryTraceiP39669.

Family and domain databases

Gene3Di3.90.550.10. 2 hits.
HAMAPiMF_00624. GlgC. 1 hit.
InterProiIPR005836. ADP_Glu_pyroP_CS.
IPR011831. GlgC.
IPR023049. GlgC_bac.
IPR005835. NTP_transferase_dom.
IPR029044. Nucleotide-diphossugar_trans.
IPR011004. Trimer_LpxA-like.
[Graphical view]
PfamiPF00483. NTP_transferase. 1 hit.
[Graphical view]
SUPFAMiSSF51161. SSF51161. 1 hit.
SSF53448. SSF53448. 2 hits.
TIGRFAMsiTIGR02091. glgC. 1 hit.
PROSITEiPS00808. ADP_GLC_PYROPHOSPH_1. 1 hit.
PS00809. ADP_GLC_PYROPHOSPH_2. 1 hit.
PS00810. ADP_GLC_PYROPHOSPH_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiGLGC_RHIRD
AccessioniPrimary (citable) accession number: P39669
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: November 11, 2015
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.