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Protein

Uncharacterized HTH-type transcriptional regulator YwbI

Gene

ywbI

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi18 – 37H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU38310-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YwbI
Gene namesi
Name:ywbI
Ordered Locus Names:BSU38310
ORF Names:ipa-24d
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001058231 – 301Uncharacterized HTH-type transcriptional regulator YwbIAdd BLAST301

Proteomic databases

PaxDbiP39592.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100020681.

Structurei

3D structure databases

ProteinModelPortaliP39592.
SMRiP39592.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 58HTH lysR-typePROSITE-ProRule annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG4105CMU. Bacteria.
ENOG410XNYY. LUCA.
HOGENOMiHOG000233514.
InParanoidiP39592.
OMAiKDGYGMQ.
PhylomeDBiP39592.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS50931. HTH_LYSR. 1 hit.

Sequencei

Sequence statusi: Complete.

P39592-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDIRHLTYFL EVARLKSFTK ASQSLYVSQP TISKMIKNLE EELGIELFYR
60 70 80 90 100
NGRQVELTDA GHSMYVQAQE IIKSFQNLTS ELNDIMEVKK GHVRIGLPPM
110 120 130 140 150
IGSGFFPRVL GDFRENYPNV TFQLVEDGSI KVQEGVGDGS LDIGVVVLPA
160 170 180 190 200
NEDIFHSFTI VKETLMLVVH PSHRLADEKE CQLRELKDEP FIFFREDFVL
210 220 230 240 250
HNRIMTECIK AGFRPHIIYE TSQWDFISEM VSANLGIGLL PERICRGLDP
260 270 280 290 300
EKVKVIPLVD PVIPWHLAII WRKDRYLSFA ARAWLEHTKS YLWDPKKDSK

G
Length:301
Mass (Da):34,677
Last modified:February 1, 1995 - v1
Checksum:i63B06C0A7D3D30B9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X73124 Genomic DNA. Translation: CAA51580.1.
AL009126 Genomic DNA. Translation: CAB15857.1.
PIRiS39679.
RefSeqiNP_391710.1. NC_000964.3.
WP_003227377.1. NZ_JNCM01000034.1.

Genome annotation databases

EnsemblBacteriaiCAB15857; CAB15857; BSU38310.
GeneIDi937626.
KEGGibsu:BSU38310.
PATRICifig|224308.179.peg.4147.

Similar proteinsi

Entry informationi

Entry nameiYWBI_BACSU
AccessioniPrimary (citable) accession number: P39592
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: January 31, 2018
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome