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Protein

Putative permease IIC component YwbA

Gene

ywbA

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionTransferase
Biological processSugar transport, Transport

Enzyme and pathway databases

BioCyciBSUB:BSU38390-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative permease IIC component YwbA
Alternative name(s):
Putative PTS system EIIC component
Gene namesi
Name:ywbA
Ordered Locus Names:BSU38390
ORF Names:ipa-16d
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

P39584:
  • Cell membrane PROSITE-ProRule annotation; Multi-pass membrane protein PROSITE-ProRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei31 – 51HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei72 – 92HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei104 – 124HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei138 – 158HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei187 – 207HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei223 – 243HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei246 – 266HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei291 – 311HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei349 – 371HelicalPROSITE-ProRule annotationAdd BLAST23
Transmembranei402 – 422HelicalPROSITE-ProRule annotationAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001867121 – 444Putative permease IIC component YwbAAdd BLAST444

Proteomic databases

PaxDbiP39584.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100020721.

Structurei

3D structure databases

ProteinModelPortaliP39584.
SMRiP39584.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 421PTS EIIC type-3PROSITE-ProRule annotationAdd BLAST414

Domaini

The EIIC domain forms the PTS system translocation channel and contains the specific substrate-binding site.

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105CK1. Bacteria.
COG1455. LUCA.
HOGENOMiHOG000224102.
InParanoidiP39584.
KOiK02761.
OMAiASFDIMA.
PhylomeDBiP39584.

Family and domain databases

InterProiView protein in InterPro
IPR003352. PTS_EIIC.
IPR004501. PTS_EIIC_3.
IPR004796. PTS_IIC_cello.
PfamiView protein in Pfam
PF02378. PTS_EIIC. 1 hit.
PIRSFiPIRSF006351. PTS_EIIC-Cellobiose. 1 hit.
TIGRFAMsiTIGR00359. cello_pts_IIC. 1 hit.
TIGR00410. lacE. 1 hit.
PROSITEiView protein in PROSITE
PS51105. PTS_EIIC_TYPE_3. 1 hit.

Sequencei

Sequence statusi: Complete.

P39584-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTFTRVMEE KIMPVAGKIA GQRHLSALRD GIILTMPLII IGSVFLILTS
60 70 80 90 100
LPIPGYADFM ASVFGNEWAD KLGYPVNASF DIMAMIAAFG IAYRLAESYG
110 120 130 140 150
VDALSAGAIS IAAFLLATPF EVPFTPHGST ESIMVGGGIP ITLLGSKGLF
160 170 180 190 200
VAMLIALFST EIYRYIIQKN IVFKMPDGVP PAVSKSFVAL IPGFIIVLLV
210 220 230 240 250
WLARLLIEMT PFQSLHNVVG DLLGTPLSIL GGSLGGSLIA EFVQMLLWSC
260 270 280 290 300
GIHGASIIGG IMAPIWYGAM DANRLAFQAG EALPSIFTTQ FFQIWINVGG
310 320 330 340 350
SGATLALVLT MLVRSRSKQM KQLGRLGIGP ALFNINEPII FGMPIVMNPL
360 370 380 390 400
LIVPFIIAPL LTITATYIGM STGLVARPAG IAVPWTMPPL ISGYLATGGK
410 420 430 440
VSGAVMQLVN LLITCAIYYP FFRIWDHQKW REESAVESGD KNVM
Length:444
Mass (Da):47,648
Last modified:February 1, 1995 - v1
Checksum:iD3964B3795274C7D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X73124 Genomic DNA. Translation: CAA51572.1.
AL009126 Genomic DNA. Translation: CAB15865.1.
PIRiS39671.
RefSeqiNP_391718.1. NC_000964.3.
WP_003242539.1. NZ_JNCM01000034.1.

Genome annotation databases

EnsemblBacteriaiCAB15865; CAB15865; BSU38390.
GeneIDi937331.
KEGGibsu:BSU38390.
PATRICifig|224308.179.peg.4155.

Similar proteinsi

Entry informationi

Entry nameiYWBA_BACSU
AccessioniPrimary (citable) accession number: P39584
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: June 7, 2017
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList