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Reviewed, UniProtKB/Swiss-Prot P39461 (FUMC_SULSO)

Last modified September 22, 2009. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Fumarate hydratase class II
      Short name=Fumarase C
    EC=4.2.1.2
Gene names
Name: fumC
Ordered Locus Names: SSO1077
OrganismSulfolobus solfataricus [Complete proteome] [HAMAP]
Taxonomic identifier2287 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus

Protein attributes

Sequence length438 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Function

May function as an auxiliary aerobic enzyme in the citric acid cycle. HAMAP MF_00743

Catalytic activity

(S)-malate = fumarate + H2O. HAMAP MF_00743

Pathway

Carbohydrate metabolism; tricarboxylic acid cycle. HAMAP MF_00743

Subunit structure

Homotetramer. HAMAP MF_00743

Subcellular location

Cytoplasm. HAMAP MF_00743

Miscellaneous

There are 2 substrate binding sites: the catalytic A site, and the non-catalytic B site that may play a role in the transfer of substrate or product between the active site and the solvent. Alternatively, the B site may bind allosteric effectors By similarity.

Sequence similarities

Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.

Biophysicochemical properties

pH dependence:

Optimum pH is 8.0. HAMAP MF_00743

Temperature dependence:

Optimum temperature is 85 degrees Celsius. Active from 40 to 90 degrees Celsius.

Ontologies

Keywords
   Biological processTricarboxylic acid cycle
   Cellular componentCytoplasm
   Molecular functionLyase
   Technical termComplete proteome
Direct protein sequencing
Gene Ontology (GO)
   Biological processtricarboxylic acid cycle

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionfumarate hydratase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 438438Fumarate hydratase class II HAMAP MF_00743
PRO_0000161334

Regions

Region101 – 1044B site By similarity
Region111 – 1133Substrate binding By similarity

Sites

Binding site781Substrate By similarity

Sequences

Sequence LengthMass (Da)Tools
P39461-1 [UniParc].

Last modified February 1, 1995. Version 1.
Checksum: 8D2A9CF37817EA6C

FASTA43847,911
        10         20         30         40         50         60 
MKYTDTAPKL FMNTGTKFPR RIIWSMGVLK KSCAKVNADL GLLDKKIADS IIKASDDLID 

        70         80         90        100        110        120 
GKLDDKIVLD VFQTGSGTGL NMNVNEVIAE VASSYSNLKV HPNDHVNFGQ SSNDTVPTAI 

       130        140        150        160        170        180 
RIAAVAEVTN RLLPALQQII SSLNKKAEEY KDVIKAGRTH LRDALPVTLG QELSAYADAF 

       190        200        210        220        230        240 
QHEHEQVMNI LEYVKELPIG GTATGTGLNS HPEFQERVIN EINRITGLGF KPANRFRAMR 

       250        260        270        280        290        300 
LLTDLLLLSG ALRNIAVDLY RLGQDIRLMF SGPLTGLNEI DLPTQEEIAG SSIMPGKTNP 

       310        320        330        340        350        360 
VTVEATLLIS AQVVGLDHAN QFASMLGEFE LSMGIPLVGY NIVTQVNFIS EALEKMSRLV 

       370        380        390        400        410        420 
IDGMVANVEK MKRYAESSPS LITIVSPVIG YDKATEIGKK LNKGMSIREA LRELGYSDNE 

       430 
INKILDLSKL VKPGFTAK 

« Hide

References

« Hide 'large scale' references
[1]"Molecular cloning, nucleotide sequence and expression of a Sulfolobus solfataricus gene encoding a class II fumarase."
Colombo S., Grisa M., Tortora P., Vanoni M.
FEBS Lett. 337:93-98(1994) [PubMed: 8276121] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], PROTEIN SEQUENCE OF 1-14.
Strain: DSM 5833 / MT-4.
[2]Erratum
Colombo S., Grisa M., Tortora P., Vanoni M.
FEBS Lett. 340:151-153(1994) [PubMed: 8119400] [Abstract]
[3]"The complete genome of the crenarchaeon Sulfolobus solfataricus P2."
She Q., Singh R.K., Confalonieri F., Zivanovic Y., Allard G., Awayez M.J., Chan-Weiher C.C.-Y., Clausen I.G., Curtis B.A., De Moors A., Erauso G., Fletcher C., Gordon P.M.K., Heikamp-de Jong I., Jeffries A.C., Kozera C.J., Medina N., Peng X. expand/collapse author list , Thi-Ngoc H.P., Redder P., Schenk M.E., Theriault C., Tolstrup N., Charlebois R.L., Doolittle W.F., Duguet M., Gaasterland T., Garrett R.A., Ragan M.A., Sensen C.W., Van der Oost J.
Proc. Natl. Acad. Sci. U.S.A. 98:7835-7840(2001) [PubMed: 11427726] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35092 / DSM 1617 / JCM 11322 / P2.
[4]"Purification and properties of a thermostable fumarate hydratase from the archaeobacterium Sulfolobus solfataricus."
Puchegger S., Redl B., Stoeffler G.
J. Gen. Microbiol. 136:1537-1541(1990) [PubMed: 2124611] [Abstract]
Cited for: CHARACTERIZATION.
Strain: ATCC 35091 / DSM 1616 / IFO 15331 / JCM 8930 / P1.

Cross-references

Sequence databases

X75402 Genomic DNA. Translation: CAA53156.1.
AE006641 Genomic DNA. Translation: AAK41339.1. Different initiation.
PIRD90260.
S40448.

3D structure databases

HSSPHSSP built from PDB template 1YFM based on UniProtKB P08417.
ModBaseSearch...

Genome annotation databases

GenomeReviewsGene locus SSO1077 in contig AE006641_GR.
KEGGsso:SSO1077.
NMPDRfig|273057.1.peg.972.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMP39461.

Enzyme and pathway databases

BioCycSSOL273057:SSO1077-MON.
BRENDA4.2.1.2. 2070.

Family and domain databases

HAMAPMF_00743.
[Tree]
InterProIPR003031. D_crystallin.
IPR018951. Fumarase_C_C.
IPR000362. Fumarate_lyase.
IPR020557. Fumarate_lyase_CS.
[Graphical view]
PfamPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00145. ARGSUCLYASE.
PR00149. FUMRATELYASE.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameFUMC_SULSO
AccessionPrimary (citable) accession number: P39461
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: September 22, 2009
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents