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Protein

Uncharacterized protein YjjU

Gene

yjjU

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probable lipid hydrolase.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei61 – 611By similarity

GO - Molecular functioni

GO - Biological processi

  • cellular response to DNA damage stimulus Source: EcoliWiki
  • lipid catabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Lipid degradation, Lipid metabolism

Enzyme and pathway databases

BioCyciEcoCyc:G7951-MONOMER.
ECOL316407:JW4340-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjjU (EC:3.1.1.-)
Gene namesi
Name:yjjU
Ordered Locus Names:b4377, JW4340
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12597. yjjU.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 357357Uncharacterized protein YjjUPRO_0000169816Add
BLAST

Proteomic databases

PaxDbiP39407.

Interactioni

Protein-protein interaction databases

BioGridi4261643. 11 interactions.
DIPiDIP-6892N.
IntActiP39407. 11 interactions.
STRINGi511145.b4377.

Structurei

3D structure databases

ProteinModelPortaliP39407.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini27 – 196170PatatinAdd
BLAST

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi59 – 635GXSXG

Sequence similaritiesi

Contains 1 patatin domain.Curated

Phylogenomic databases

eggNOGiENOG4108NRW. Bacteria.
COG4667. LUCA.
HOGENOMiHOG000279055.
InParanoidiP39407.
OMAiSAYVCNQ.
PhylomeDBiP39407.

Family and domain databases

InterProiIPR016035. Acyl_Trfase/lysoPLipase.
IPR002641. Patatin/PLipase_A2-rel.
[Graphical view]
PfamiPF01734. Patatin. 1 hit.
[Graphical view]
SUPFAMiSSF52151. SSF52151. 1 hit.

Sequencei

Sequence statusi: Complete.

P39407-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQRIPVTLG NIAPLSLRPF QPGRIALVCE GGGQRGIFTA GVLDEFMRAQ
60 70 80 90 100
FNPFDLYLGT SAGAQNLSAF ICNQPGYARK VIMRYTTKRE FFDPLRFVRG
110 120 130 140 150
GNLIDLDWLV EATASQMPLQ MDTAARLFDS GKSFYMCACR QDDYAPNYFL
160 170 180 190 200
PTKQNWLDVI RASSAIPGFY RSGVSLEGIN YLDGGISDAI PVKEAARQGA
210 220 230 240 250
KTLVVIRTVP SQMYYTPQWF KRMERWLGDS SLQPLVNLVQ HHETSYRDIQ
260 270 280 290 300
QFIEKPPGKL RIFEIYPPKP LHSIALGSRI PALREDYKLG RLCGRYFLAT
310 320 330 340 350
VGKLLTEKAP LTRHLVPVVT PESIVIPPAP VANDTLVAEV SDAPQANDPT

FNNEDLA
Length:357
Mass (Da):39,832
Last modified:February 1, 1995 - v1
Checksum:iD7A57185B93CCEAA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97273.1.
U00096 Genomic DNA. Translation: AAC77330.1.
AP009048 Genomic DNA. Translation: BAE78366.1.
PIRiS56601.
RefSeqiNP_418794.1. NC_000913.3.
WP_001299799.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77330; AAC77330; b4377.
BAE78366; BAE78366; BAE78366.
GeneIDi948906.
KEGGiecj:JW4340.
eco:b4377.
PATRICi32124366. VBIEscCol129921_4523.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97273.1.
U00096 Genomic DNA. Translation: AAC77330.1.
AP009048 Genomic DNA. Translation: BAE78366.1.
PIRiS56601.
RefSeqiNP_418794.1. NC_000913.3.
WP_001299799.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP39407.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261643. 11 interactions.
DIPiDIP-6892N.
IntActiP39407. 11 interactions.
STRINGi511145.b4377.

Proteomic databases

PaxDbiP39407.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77330; AAC77330; b4377.
BAE78366; BAE78366; BAE78366.
GeneIDi948906.
KEGGiecj:JW4340.
eco:b4377.
PATRICi32124366. VBIEscCol129921_4523.

Organism-specific databases

EchoBASEiEB2482.
EcoGeneiEG12597. yjjU.

Phylogenomic databases

eggNOGiENOG4108NRW. Bacteria.
COG4667. LUCA.
HOGENOMiHOG000279055.
InParanoidiP39407.
OMAiSAYVCNQ.
PhylomeDBiP39407.

Enzyme and pathway databases

BioCyciEcoCyc:G7951-MONOMER.
ECOL316407:JW4340-MONOMER.

Miscellaneous databases

PROiP39407.

Family and domain databases

InterProiIPR016035. Acyl_Trfase/lysoPLipase.
IPR002641. Patatin/PLipase_A2-rel.
[Graphical view]
PfamiPF01734. Patatin. 1 hit.
[Graphical view]
SUPFAMiSSF52151. SSF52151. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYJJU_ECOLI
AccessioniPrimary (citable) accession number: P39407
Secondary accession number(s): Q2M5U0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: September 7, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.