Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative uncharacterized protein YjiV

Gene

yjiV

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11386-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YjiV
Gene namesi
Name:yjiV
Synonyms:mcrD
Ordered Locus Names:b4486
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12583. yjiV.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 906906Putative uncharacterized protein YjiVPRO_0000169798Add
BLAST

Proteomic databases

PRIDEiP39393.

Structurei

3D structure databases

ProteinModelPortaliP39393.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000202518.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR027417. P-loop_NTPase.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P39393-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYVNQRQNCD CGSPVYEVAF CNDCNEPHLL ARDKKGKLVQ WENKGGDEFS
60 70 80 90 100
LQDEVPVEHD ATEEKVEKEN SFQPPLIIAA GETSEAGYTL QRLDRQTRRI
110 120 130 140 150
GVINNDSIPL IINDIEQVCS ASGCGYRGMS GKQPFRRALL GGPFYVTNIV
160 170 180 190 200
PTVLEYCQDF TSDEGKEGVG PDSLPGRGRR LITFTDSRQG TARMAVRMQQ
210 220 230 240 250
EAERSRLRGS VVEILSWHQR TQTSTAPNAN ADLEKLAARA KQAREQAEEY
260 270 280 290 300
RSWGMPDQAK LSQAQAEQLE QAYQAATGGK AATILVSRTW TEMVNELKER
310 320 330 340 350
ADIRGPVLQY NHYLKPEVFN ENGGPLKLSE MLLFREFMRR PKRTNSLETQ
360 370 380 390 400
GLVQVGYQGL EKIHKSPLHW QEKGLTLDDW RDFLKVTLDH YVRESNFTQL
410 420 430 440 450
DDELKNWIGS RFSSKFVRNP ESKDPEDNQN RRWPQIRNGN VSHRLAKLLM
460 470 480 490 500
LGAGFKTVNA ATIDIINTWL KEAWAQLTGP LAVLKPDGNR FYLPKEHMTF
510 520 530 540 550
SLITDAWICP VTNKILDTAF KGLTPYLPTH ISFEHLTLAQ YDTFVAQKVT
560 570 580 590 600
MPEIWKLDRS QEDYAEGLAK ARDWVSHDPL IAQLRSENVW TDINDRVVEG
610 620 630 640 650
GFYYRTAEHS AQQSSERLQS YEKMFKNGQL NVLNCSTTME MGVDTDRVMT
660 670 680 690 700
LASRSQQATI PGPEWHLNDE LVVRSLGYKT VELNEFILPA KATNAVERVK
710 720 730 740 750
DIQIHKQLNG PLSQFGQRFW DVLFNDHEEA QSLMNNTRIT GVHYTDRYLQ
760 770 780 790 800
NPVALALLGS ILRPLKTKLT DGAEVTLDTL FKDKDRPGNR PFHDWMSIAD
810 820 830 840 850
FQDFADQWFA AALGRPVELT VFDSPRDIPH HRKLTVTFED GQVLKIRFDQ
860 870 880 890 900
GMGYWRINFS SQWHYFDFRD DVSFQLVKMA QACKEGNVAN SEESWATDVL

VEVIAS
Length:906
Mass (Da):103,403
Last modified:February 1, 2005 - v3
Checksum:i5155D7A9C59639C6
GO

Sequence cautioni

The sequence AAA97239.1 differs from that shown. Reason: Frameshift at positions 102 and 416. Curated
The sequence AAA97240.1 differs from that shown. Reason: Frameshift at positions 102 and 416. Curated
The sequence AAA97241.1 differs from that shown. Reason: Frameshift at positions 102 and 416. Curated
The sequence CAA39195.1 differs from that shown. Reason: Frameshift at position 890. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97239.1. Frameshift.
U14003 Genomic DNA. Translation: AAA97240.1. Frameshift.
U14003 Genomic DNA. Translation: AAA97241.1. Frameshift.
U00096 Genomic DNA. No translation available.
X55662 Genomic DNA. Translation: CAA39195.1. Frameshift.
PIRiA65249.
S56569.
S56570.
RefSeqiWP_014639049.1. NZ_LN832404.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97239.1. Frameshift.
U14003 Genomic DNA. Translation: AAA97240.1. Frameshift.
U14003 Genomic DNA. Translation: AAA97241.1. Frameshift.
U00096 Genomic DNA. No translation available.
X55662 Genomic DNA. Translation: CAA39195.1. Frameshift.
PIRiA65249.
S56569.
S56570.
RefSeqiWP_014639049.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP39393.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiP39393.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

EchoBASEiEB2469.
EcoGeneiEG12583. yjiV.

Phylogenomic databases

HOGENOMiHOG000202518.

Enzyme and pathway databases

BioCyciEcoCyc:EG11386-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR027417. P-loop_NTPase.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes."
    Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.
    Nucleic Acids Res. 23:2105-2119(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], SEQUENCE REVISION.
    Strain: K12 / MG1655 / ATCC 47076.
  3. Cited for: SEQUENCE REVISION.
  4. "Nucleotide sequence of the DNA region immediately downstream of the E. coli McrB genes."
    Zheng L., Braymer H.D.
    Submitted (SEP-1990) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 624-906.
    Strain: K12.

Entry informationi

Entry nameiYJIV_ECOLI
AccessioniPrimary (citable) accession number: P39393
Secondary accession number(s): P27301, P39392, Q6BEW7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 2005
Last modified: October 14, 2015
This is version 76 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

A portion of this ORF was originally annotated as mcrD, and reported to inhibit mcrE restriction.Curated
Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.