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Protein

Putative uncharacterized protein YjiP

Gene

yjiP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

GO - Biological processi

  • single-species biofilm formation Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7934-MONOMER.
ECOL316407:JW4302-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YjiP
Gene namesi
Name:yjiP
Synonyms:yjiQ
Ordered Locus Names:b4339, JW4302
ORF Names:b4338
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12577. yjiP.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 306306Putative uncharacterized protein YjiPPRO_0000169794Add
BLAST

Proteomic databases

PRIDEiP39387.

Interactioni

Protein-protein interaction databases

IntActiP39387. 1 interaction.
STRINGi316407.85677081.

Structurei

3D structure databases

ProteinModelPortaliP39387.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the YadD/YfaD/YhgA/YjiP family.Curated

Phylogenomic databases

eggNOGiCOG5464. LUCA.
HOGENOMiHOG000116866.
InParanoidiP39387.
OMAiTRRMPHH.
PhylomeDBiP39387.

Family and domain databases

InterProiIPR010106. CHP01784.
IPR006842. Transposase_31.
[Graphical view]
PfamiPF04754. Transposase_31. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01784. T_den_put_tspse. 1 hit.

Sequencei

Sequence statusi: Complete.

P39387-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNFTTSTPH DALFKTFLTH PDTARDFMEI HLPKDLRELC DLDSLKLESA
60 70 80 90 100
SFVDEKLRAL HSDILWSVKT REGDGYIYVV IEHQSREDIH MAFRLMRYSM
110 120 130 140 150
AVMQRHIEHD KRQPLPLVIP MLFYHGSRSP YPWSLCWLDE FADPTTARKL
160 170 180 190 200
YNAAFPLVDV TVVPDDEIVQ HRRVALLELI QKHIRQRDLM GLIDQLVVLL
210 220 230 240 250
VTECANDSQI TALLNYILLT GDEARFNEFI SELTRRMPQH RERIMTIAER
260 270 280 290 300
IHNDGYIKGE QRILRLLLQN GADPEWIQKI TGLSAEQMQA LRQPLPERER

YSWLKS
Length:306
Mass (Da):35,887
Last modified:August 29, 2001 - v2
Checksum:i097D4A10A87836DE
GO

Sequence cautioni

The sequence AAA97234 differs from that shown. Reason: Erroneous termination at position 104. Translated as Gln.Curated
The sequence AAA97235 differs from that shown. Reason: Erroneous termination at position 104. Translated as Gln.Curated
The sequence BAE78331 differs from that shown. Reason: Erroneous termination at position 104. Translated as Gln.Curated
The sequence U00096 differs from that shown. Reason: Erroneous termination at position 104. Translated as Gln.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97234.1. Sequence problems.
U14003 Genomic DNA. Translation: AAA97235.1. Sequence problems.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE78331.1. Sequence problems.
PIRiS56563.
S56564.
RefSeqiWP_000181202.1. NZ_CP010444.1.

Genome annotation databases

EnsemblBacteriaiBAE78331; BAE78331; BAE78331.
KEGGiecj:JW4302.
PATRICi48668278. VBIEscCol107702_4389.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97234.1. Sequence problems.
U14003 Genomic DNA. Translation: AAA97235.1. Sequence problems.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE78331.1. Sequence problems.
PIRiS56563.
S56564.
RefSeqiWP_000181202.1. NZ_CP010444.1.

3D structure databases

ProteinModelPortaliP39387.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP39387. 1 interaction.
STRINGi316407.85677081.

Proteomic databases

PRIDEiP39387.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE78331; BAE78331; BAE78331.
KEGGiecj:JW4302.
PATRICi48668278. VBIEscCol107702_4389.

Organism-specific databases

EchoBASEiEB2465.
EcoGeneiEG12577. yjiP.

Phylogenomic databases

eggNOGiCOG5464. LUCA.
HOGENOMiHOG000116866.
InParanoidiP39387.
OMAiTRRMPHH.
PhylomeDBiP39387.

Enzyme and pathway databases

BioCyciEcoCyc:G7934-MONOMER.
ECOL316407:JW4302-MONOMER.

Family and domain databases

InterProiIPR010106. CHP01784.
IPR006842. Transposase_31.
[Graphical view]
PfamiPF04754. Transposase_31. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01784. T_den_put_tspse. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYJIP_ECOLI
AccessioniPrimary (citable) accession number: P39387
Secondary accession number(s): P39388, Q2M5X5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: August 29, 2001
Last modified: November 11, 2015
This is version 97 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.