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Protein

Uncharacterized protein YjiM

Gene

yjiM

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  • cellular response to DNA damage stimulus Source: EcoliWiki
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7932-MONOMER.
ECOL316407:JW5786-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjiM
Gene namesi
Name:yjiM
Ordered Locus Names:b4335, JW5786
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12574. yjiM.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 383383Uncharacterized protein YjiMPRO_0000169792Add
BLAST

Proteomic databases

PaxDbiP39384.
PRIDEiP39384.

Interactioni

Protein-protein interaction databases

BioGridi4262757. 5 interactions.
DIPiDIP-12639N.
IntActiP39384. 1 interaction.
STRINGi511145.b4335.

Structurei

3D structure databases

ProteinModelPortaliP39384.
SMRiP39384. Positions 7-383.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105DCU. Bacteria.
COG1775. LUCA.
HOGENOMiHOG000282745.
InParanoidiP39384.
OMAiCPYMYFS.
PhylomeDBiP39384.

Family and domain databases

InterProiIPR010327. FldB/FldC_alpha/beta.
[Graphical view]
PfamiPF06050. HGD-D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P39384-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLVTDLPAI FDQFSEARQT GFLTVMDLKE RGIPLVGTYC TFMPQEIPMA
60 70 80 90 100
AGAVVVSLCS TSDETIEEAE KDLPRNLCPL IKSSYGFGKT DKCPYFYFSD
110 120 130 140 150
LVVGETTCDG KKKMYEYMAE FKPVHVMQLP NSVKDDASRA LWKAEMLRLQ
160 170 180 190 200
KTVEERFGHE ISEDALRDAI ALKNRERRAL ANFYHLGQLN PPALSGSDIL
210 220 230 240 250
KVVYGATFRF DKEALINELD AMTARVRQQW EEGQRLDPRP RILITGCPIG
260 270 280 290 300
GAAEKVVRAI EENGGWVVGY ENCTGAKATE QCVAETGDVY DALADKYLAI
310 320 330 340 350
GCSCVSPNDQ RLKMLSQMVE EYQVDGVVDV ILQACHTYAV ESLAIKRHVR
360 370 380
QQHNIPYIAI ETDYSTSDVG QLSTRVAAFI EML
Length:383
Mass (Da):42,743
Last modified:December 1, 2000 - v2
Checksum:i701CBE69D0BFDACC
GO

Sequence cautioni

The sequence AAA97231 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97231.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77291.2.
AP009048 Genomic DNA. Translation: BAE78328.1.
PIRiS56560.
RefSeqiNP_418755.4. NC_000913.3.
WP_001300012.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77291; AAC77291; b4335.
BAE78328; BAE78328; BAE78328.
GeneIDi945789.
KEGGiecj:JW5786.
eco:b4335.
PATRICi32124276. VBIEscCol129921_4481.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97231.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77291.2.
AP009048 Genomic DNA. Translation: BAE78328.1.
PIRiS56560.
RefSeqiNP_418755.4. NC_000913.3.
WP_001300012.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP39384.
SMRiP39384. Positions 7-383.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262757. 5 interactions.
DIPiDIP-12639N.
IntActiP39384. 1 interaction.
STRINGi511145.b4335.

Proteomic databases

PaxDbiP39384.
PRIDEiP39384.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77291; AAC77291; b4335.
BAE78328; BAE78328; BAE78328.
GeneIDi945789.
KEGGiecj:JW5786.
eco:b4335.
PATRICi32124276. VBIEscCol129921_4481.

Organism-specific databases

EchoBASEiEB2462.
EcoGeneiEG12574. yjiM.

Phylogenomic databases

eggNOGiENOG4105DCU. Bacteria.
COG1775. LUCA.
HOGENOMiHOG000282745.
InParanoidiP39384.
OMAiCPYMYFS.
PhylomeDBiP39384.

Enzyme and pathway databases

BioCyciEcoCyc:G7932-MONOMER.
ECOL316407:JW5786-MONOMER.

Miscellaneous databases

PROiP39384.

Family and domain databases

InterProiIPR010327. FldB/FldC_alpha/beta.
[Graphical view]
PfamiPF06050. HGD-D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYJIM_ECOLI
AccessioniPrimary (citable) accession number: P39384
Secondary accession number(s): Q2M5X8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: December 1, 2000
Last modified: September 7, 2016
This is version 100 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.