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Protein

Uncharacterized protein YjiH

Gene

yjiH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7927-MONOMER.
ECOL316407:JW5783-MONOMER.

Protein family/group databases

TCDBi9.A.5.4.2. the putative arginine transporter (argw) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjiH
Gene namesi
Name:yjiH
Ordered Locus Names:b4330, JW5783
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12569. yjiH.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei17 – 3721HelicalSequence analysisAdd
BLAST
Transmembranei79 – 9921HelicalSequence analysisAdd
BLAST
Transmembranei112 – 13221HelicalSequence analysisAdd
BLAST
Transmembranei181 – 20121HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 227227Uncharacterized protein YjiHPRO_0000169788Add
BLAST

Proteomic databases

PaxDbiP39379.

Interactioni

Protein-protein interaction databases

BioGridi4261262. 9 interactions.
STRINGi511145.b4330.

Structurei

3D structure databases

ProteinModelPortaliP39379.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG41074DU. Bacteria.
COG3314. LUCA.
HOGENOMiHOG000111644.
OMAiMFVLKFV.
OrthoDBiEOG6JTC8W.

Family and domain databases

InterProiIPR011642. Gate_dom.
[Graphical view]
PfamiPF07670. Gate. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P39379-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQQGDAVAG ELATEKVGIK GYLAFFLTII FFSGVFSGTD SWWRVFDFSV
60 70 80 90 100
LNGSFGQLPG ANGATTSFRG AGGAGAKDGF LFALELAPSV ILSLGIISIT
110 120 130 140 150
DGLGGLRAAQ QLMTPVLKPL LGIPGICSLA LIANLQNTDA AAGMTKELAQ
160 170 180 190 200
EGEITERDKV IFAAYQTSGS AIITNYFSSG VAVFAFLGTS VIVPLAVILV
210 220
FKFVGANILR VWLNFEERRN PTQGAQA
Length:227
Mass (Da):23,793
Last modified:December 1, 2000 - v2
Checksum:i86226198118E554B
GO

Sequence cautioni

The sequence AAA97226.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97226.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77286.2.
AP009048 Genomic DNA. Translation: BAE78323.1.
RefSeqiNP_418750.2. NC_000913.3.
WP_001295597.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77286; AAC77286; b4330.
BAE78323; BAE78323; BAE78323.
GeneIDi948856.
KEGGiecj:JW5783.
eco:b4330.
PATRICi32124262. VBIEscCol129921_4474.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97226.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77286.2.
AP009048 Genomic DNA. Translation: BAE78323.1.
RefSeqiNP_418750.2. NC_000913.3.
WP_001295597.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP39379.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261262. 9 interactions.
STRINGi511145.b4330.

Protein family/group databases

TCDBi9.A.5.4.2. the putative arginine transporter (argw) family.

Proteomic databases

PaxDbiP39379.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77286; AAC77286; b4330.
BAE78323; BAE78323; BAE78323.
GeneIDi948856.
KEGGiecj:JW5783.
eco:b4330.
PATRICi32124262. VBIEscCol129921_4474.

Organism-specific databases

EchoBASEiEB2457.
EcoGeneiEG12569. yjiH.

Phylogenomic databases

eggNOGiENOG41074DU. Bacteria.
COG3314. LUCA.
HOGENOMiHOG000111644.
OMAiMFVLKFV.
OrthoDBiEOG6JTC8W.

Enzyme and pathway databases

BioCyciEcoCyc:G7927-MONOMER.
ECOL316407:JW5783-MONOMER.

Miscellaneous databases

PROiP39379.

Family and domain databases

InterProiIPR011642. Gate_dom.
[Graphical view]
PfamiPF07670. Gate. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes."
    Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.
    Nucleic Acids Res. 23:2105-2119(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYJIH_ECOLI
AccessioniPrimary (citable) accession number: P39379
Secondary accession number(s): Q2M5Y3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: December 1, 2000
Last modified: January 20, 2016
This is version 101 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.