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Protein

Putative uncharacterized protein YjhR

Gene

yjhR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

BioCyciEcoCyc:G7918-MONOMER.
ECOL316407:JW4271-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YjhR
Gene namesi
Name:yjhR
Ordered Locus Names:b4308, JW4271
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12560. yjhR.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 338338Putative uncharacterized protein YjhRPRO_0000169784Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi4259376. 606 interactions.
IntActiP39369. 7 interactions.
STRINGi316407.85677051.

Structurei

3D structure databases

ProteinModelPortaliP39369.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini276 – 30328PLD phosphodiesterasePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 PLD phosphodiesterase domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG1112. LUCA.
HOGENOMiHOG000081394.
OMAiEHHESLQ.

Family and domain databases

InterProiIPR027417. P-loop_NTPase.
IPR025202. PLD-like_dom.
IPR001736. PLipase_D/transphosphatidylase.
[Graphical view]
PfamiPF13091. PLDc_2. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS50035. PLD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P39369-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGYLHIDGRG MKPNGGSRHN PLEAETIAAW LVAHKDDIER HYGEPLYKVV
60 70 80 90 100
GVVTPFSAQV NAIKMSLRKL EINGKDEQGL LTVGTVHSLQ GAERAIVLFS
110 120 130 140 150
PVYSKHEDGR FLDSNSTILN VAVSRAKDSF LVFGDMDLIE MQPAFSPRGL
160 170 180 190 200
LAKYLFSSDN NALQFEFQKR QDLISAHTQI STLHGVEQHD EFLNKTLAGA
210 220 230 240 250
QKKITIISPW LSWQKVEQTG FLASMALARS RGIDITVVTD KNCNIAHVDD
260 270 280 290 300
DKRQEKQHLL NDAVEKLNKM GIATKLVNRV HSKIVIEDEE LLCVGSFNWF
310 320 330
SATREDKYQR YDTSLVYRGE GVKNEIKAIY GSLDQRQL
Length:338
Mass (Da):37,997
Last modified:February 1, 1995 - v1
Checksum:i5D1D4C2EC1E2A7E1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97204.1.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE78301.1.
PIRiS56533.
RefSeqiWP_001312504.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiBAE78301; BAE78301; BAE78301.
KEGGiecj:JW4271.
PATRICi48668203. VBIEscCol107702_4352.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97204.1.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE78301.1.
PIRiS56533.
RefSeqiWP_001312504.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP39369.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259376. 606 interactions.
IntActiP39369. 7 interactions.
STRINGi316407.85677051.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE78301; BAE78301; BAE78301.
KEGGiecj:JW4271.
PATRICi48668203. VBIEscCol107702_4352.

Organism-specific databases

EchoBASEiEB2448.
EcoGeneiEG12560. yjhR.

Phylogenomic databases

eggNOGiCOG1112. LUCA.
HOGENOMiHOG000081394.
OMAiEHHESLQ.

Enzyme and pathway databases

BioCyciEcoCyc:G7918-MONOMER.
ECOL316407:JW4271-MONOMER.

Family and domain databases

InterProiIPR027417. P-loop_NTPase.
IPR025202. PLD-like_dom.
IPR001736. PLipase_D/transphosphatidylase.
[Graphical view]
PfamiPF13091. PLDc_2. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS50035. PLD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYJHR_ECOLI
AccessioniPrimary (citable) accession number: P39369
Secondary accession number(s): Q2M605
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: April 13, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.