Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized protein YjhP

Gene

yjhP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7916-MONOMER.
ECOL316407:JW4268-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjhP
Gene namesi
Name:yjhP
Ordered Locus Names:b4306, JW4268
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12558. yjhP.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei104 – 12219HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 248248Uncharacterized protein YjhPPRO_0000169783Add
BLAST

Proteomic databases

PaxDbiP39367.
PRIDEiP39367.

Interactioni

Protein-protein interaction databases

BioGridi4262744. 109 interactions.
DIPiDIP-12624N.
IntActiP39367. 3 interactions.
STRINGi511145.b4306.

Structurei

Secondary structure

1
248
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi6 – 105Combined sources
Beta strandi15 – 195Combined sources
Helixi22 – 3110Combined sources
Beta strandi39 – 446Combined sources
Helixi49 – 579Combined sources
Beta strandi61 – 677Combined sources
Helixi69 – 8113Combined sources
Turni85 – 873Combined sources
Beta strandi88 – 936Combined sources
Beta strandi104 – 1118Combined sources
Helixi113 – 1153Combined sources
Beta strandi117 – 1193Combined sources
Helixi120 – 1267Combined sources
Beta strandi129 – 14315Combined sources
Helixi150 – 1545Combined sources
Turni155 – 1573Combined sources
Helixi161 – 1633Combined sources
Helixi167 – 1759Combined sources
Turni176 – 1783Combined sources
Beta strandi183 – 1864Combined sources
Helixi189 – 20719Combined sources
Helixi216 – 23217Combined sources
Helixi234 – 2374Combined sources
Beta strandi238 – 2458Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1NKVX-ray2.90A/B/C1-248[»]
ProteinModelPortaliP39367.
SMRiP39367. Positions 4-248.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP39367.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105DTA. Bacteria.
ENOG410XQ9J. LUCA.
HOGENOMiHOG000015884.
InParanoidiP39367.
OMAiESAHRIH.
OrthoDBiEOG6P5ZC8.
PhylomeDBiP39367.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
InterProiIPR025714. Methyltranfer_dom.
IPR017031. Pre_MeTrfase_YjhP.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF13847. Methyltransf_31. 1 hit.
[Graphical view]
PIRSFiPIRSF034653. Mtase_yjhp_prd. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.

Sequencei

Sequence statusi: Complete.

P39367-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDIPRIFTIS ESEHRIHNPF TEEKYATLGR VLRMKPGTRI LDLGSGSGEM
60 70 80 90 100
LCTWARDHGI TGTGIDMSSL FTAQAKRRAE ELGVSERVHF IHNDAAGYVA
110 120 130 140 150
NEKCDVAACV GATWIAGGFA GAEELLAQSL KPGGIMLIGE PYWRQLPATE
160 170 180 190 200
EIAQACGVSS TSDFLTLPGL VGAFDDLGYD VVEMVLADQE GWDRYEAAKW
210 220 230 240
LTMRRWLEAN PDDDFAAEVR AELNIAPKRY VTYARECFGW GVFALIAR
Length:248
Mass (Da):27,354
Last modified:February 1, 1995 - v1
Checksum:i121B19CAECB163EB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97202.1.
U00096 Genomic DNA. Translation: AAC77262.1.
AP009048 Genomic DNA. Translation: BAE78298.1.
PIRiS56531.
RefSeqiNP_418726.1. NC_000913.3.
WP_000354251.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77262; AAC77262; b4306.
BAE78298; BAE78298; BAE78298.
GeneIDi946851.
KEGGiecj:JW4268.
eco:b4306.
PATRICi32124200. VBIEscCol129921_4443.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97202.1.
U00096 Genomic DNA. Translation: AAC77262.1.
AP009048 Genomic DNA. Translation: BAE78298.1.
PIRiS56531.
RefSeqiNP_418726.1. NC_000913.3.
WP_000354251.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1NKVX-ray2.90A/B/C1-248[»]
ProteinModelPortaliP39367.
SMRiP39367. Positions 4-248.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262744. 109 interactions.
DIPiDIP-12624N.
IntActiP39367. 3 interactions.
STRINGi511145.b4306.

Proteomic databases

PaxDbiP39367.
PRIDEiP39367.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77262; AAC77262; b4306.
BAE78298; BAE78298; BAE78298.
GeneIDi946851.
KEGGiecj:JW4268.
eco:b4306.
PATRICi32124200. VBIEscCol129921_4443.

Organism-specific databases

EchoBASEiEB2446.
EcoGeneiEG12558. yjhP.

Phylogenomic databases

eggNOGiENOG4105DTA. Bacteria.
ENOG410XQ9J. LUCA.
HOGENOMiHOG000015884.
InParanoidiP39367.
OMAiESAHRIH.
OrthoDBiEOG6P5ZC8.
PhylomeDBiP39367.

Enzyme and pathway databases

BioCyciEcoCyc:G7916-MONOMER.
ECOL316407:JW4268-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP39367.
PROiP39367.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
InterProiIPR025714. Methyltranfer_dom.
IPR017031. Pre_MeTrfase_YjhP.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF13847. Methyltransf_31. 1 hit.
[Graphical view]
PIRSFiPIRSF034653. Mtase_yjhp_prd. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes."
    Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.
    Nucleic Acids Res. 23:2105-2119(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. "X-ray structure of yjhP from E.coli northeast structural genomics research consortium (NESG) target ER13."
    Northeast structural genomics consortium (NESG)
    Submitted (JAN-2005) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.9 ANGSTROMS) OF 1-248.

Entry informationi

Entry nameiYJHP_ECOLI
AccessioniPrimary (citable) accession number: P39367
Secondary accession number(s): Q2M608
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: April 13, 2016
This is version 116 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.