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Protein

Uncharacterized protein YjhP

Gene

yjhP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7916-MONOMER.
ECOL316407:JW4268-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjhP
Gene namesi
Name:yjhP
Ordered Locus Names:b4306, JW4268
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12558. yjhP.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei104 – 122HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001697831 – 248Uncharacterized protein YjhPAdd BLAST248

Proteomic databases

PaxDbiP39367.
PRIDEiP39367.

Interactioni

Protein-protein interaction databases

BioGridi4262744. 109 interactors.
DIPiDIP-12624N.
IntActiP39367. 3 interactors.
STRINGi511145.b4306.

Structurei

Secondary structure

1248
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi6 – 10Combined sources5
Beta strandi15 – 19Combined sources5
Helixi22 – 31Combined sources10
Beta strandi39 – 44Combined sources6
Helixi49 – 57Combined sources9
Beta strandi61 – 67Combined sources7
Helixi69 – 81Combined sources13
Turni85 – 87Combined sources3
Beta strandi88 – 93Combined sources6
Beta strandi104 – 111Combined sources8
Helixi113 – 115Combined sources3
Beta strandi117 – 119Combined sources3
Helixi120 – 126Combined sources7
Beta strandi129 – 143Combined sources15
Helixi150 – 154Combined sources5
Turni155 – 157Combined sources3
Helixi161 – 163Combined sources3
Helixi167 – 175Combined sources9
Turni176 – 178Combined sources3
Beta strandi183 – 186Combined sources4
Helixi189 – 207Combined sources19
Helixi216 – 232Combined sources17
Helixi234 – 237Combined sources4
Beta strandi238 – 245Combined sources8

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1NKVX-ray2.90A/B/C1-248[»]
ProteinModelPortaliP39367.
SMRiP39367.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP39367.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105DTA. Bacteria.
ENOG410XQ9J. LUCA.
HOGENOMiHOG000015884.
InParanoidiP39367.
OMAiESAHRIH.
PhylomeDBiP39367.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
InterProiIPR025714. Methyltranfer_dom.
IPR017031. Pre_MeTrfase_YjhP.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF13847. Methyltransf_31. 1 hit.
[Graphical view]
PIRSFiPIRSF034653. Mtase_yjhp_prd. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.

Sequencei

Sequence statusi: Complete.

P39367-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDIPRIFTIS ESEHRIHNPF TEEKYATLGR VLRMKPGTRI LDLGSGSGEM
60 70 80 90 100
LCTWARDHGI TGTGIDMSSL FTAQAKRRAE ELGVSERVHF IHNDAAGYVA
110 120 130 140 150
NEKCDVAACV GATWIAGGFA GAEELLAQSL KPGGIMLIGE PYWRQLPATE
160 170 180 190 200
EIAQACGVSS TSDFLTLPGL VGAFDDLGYD VVEMVLADQE GWDRYEAAKW
210 220 230 240
LTMRRWLEAN PDDDFAAEVR AELNIAPKRY VTYARECFGW GVFALIAR
Length:248
Mass (Da):27,354
Last modified:February 1, 1995 - v1
Checksum:i121B19CAECB163EB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97202.1.
U00096 Genomic DNA. Translation: AAC77262.1.
AP009048 Genomic DNA. Translation: BAE78298.1.
PIRiS56531.
RefSeqiNP_418726.1. NC_000913.3.
WP_000354251.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77262; AAC77262; b4306.
BAE78298; BAE78298; BAE78298.
GeneIDi946851.
KEGGiecj:JW4268.
eco:b4306.
PATRICi32124200. VBIEscCol129921_4443.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97202.1.
U00096 Genomic DNA. Translation: AAC77262.1.
AP009048 Genomic DNA. Translation: BAE78298.1.
PIRiS56531.
RefSeqiNP_418726.1. NC_000913.3.
WP_000354251.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1NKVX-ray2.90A/B/C1-248[»]
ProteinModelPortaliP39367.
SMRiP39367.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262744. 109 interactors.
DIPiDIP-12624N.
IntActiP39367. 3 interactors.
STRINGi511145.b4306.

Proteomic databases

PaxDbiP39367.
PRIDEiP39367.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77262; AAC77262; b4306.
BAE78298; BAE78298; BAE78298.
GeneIDi946851.
KEGGiecj:JW4268.
eco:b4306.
PATRICi32124200. VBIEscCol129921_4443.

Organism-specific databases

EchoBASEiEB2446.
EcoGeneiEG12558. yjhP.

Phylogenomic databases

eggNOGiENOG4105DTA. Bacteria.
ENOG410XQ9J. LUCA.
HOGENOMiHOG000015884.
InParanoidiP39367.
OMAiESAHRIH.
PhylomeDBiP39367.

Enzyme and pathway databases

BioCyciEcoCyc:G7916-MONOMER.
ECOL316407:JW4268-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP39367.
PROiP39367.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
InterProiIPR025714. Methyltranfer_dom.
IPR017031. Pre_MeTrfase_YjhP.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF13847. Methyltransf_31. 1 hit.
[Graphical view]
PIRSFiPIRSF034653. Mtase_yjhp_prd. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYJHP_ECOLI
AccessioniPrimary (citable) accession number: P39367
Secondary accession number(s): Q2M608
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: November 2, 2016
This is version 120 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.