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Protein

Putative sgc region protein SgcQ

Gene

sgcQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7915-MONOMER.
ECOL316407:JW4265-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative sgc region protein SgcQ
Gene namesi
Name:sgcQ
Synonyms:yjhM
Ordered Locus Names:b4303, JW4265
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12555. sgcQ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 268268Putative sgc region protein SgcQPRO_0000159329Add
BLAST

Proteomic databases

PaxDbiP39364.

Interactioni

Protein-protein interaction databases

BioGridi4261496. 10 interactions.
IntActiP39364. 1 interaction.
STRINGi511145.b4303.

Structurei

3D structure databases

ProteinModelPortaliP39364.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the BtpA family.Curated

Phylogenomic databases

eggNOGiENOG4106P19. Bacteria.
COG0434. LUCA.
HOGENOMiHOG000077119.
InParanoidiP39364.
KOiK06971.
OMAiENFFDAP.
OrthoDBiEOG66QKVZ.
PhylomeDBiP39364.

Family and domain databases

InterProiIPR005137. PSI_BtpA.
IPR011060. RibuloseP-bd_barrel.
[Graphical view]
PANTHERiPTHR21381. PTHR21381. 1 hit.
PfamiPF03437. BtpA. 1 hit.
[Graphical view]
PIRSFiPIRSF005956. BtpA. 1 hit.
ProDomiPD011184. PSI_BtpA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF51366. SSF51366. 1 hit.
TIGRFAMsiTIGR00259. thylakoid_BtpA. 1 hit.

Sequencei

Sequence statusi: Complete.

P39364-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSWLKEVIGT EKAVIAMCHL RALPGDPSFD AQLGMNWVID KAWDDLMALQ
60 70 80 90 100
NGGVDAVMFS NEFSLPYLTK VRPETTAAMA RIIGQLMSDI RIPFGVNVLW
110 120 130 140 150
DPVASFDLAM ATGAKFIREI FTGAYASDFG VWDTNVGETI RHQHRIGAGE
160 170 180 190 200
VKTLFNIVPE AAVYLGNRDI CSIAKSTVFN NHPDALCVSG LTAGTRTDSA
210 220 230 240 250
LLKRVKETVP DTVVLANTGV CLENVEEQLS IADGCVTATT FKKDGVFANF
260
VDQARVSQFM EKVHHIRR
Length:268
Mass (Da):29,355
Last modified:February 1, 1995 - v1
Checksum:i4E6E3227D19FB63E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97199.1.
U00096 Genomic DNA. Translation: AAC77259.1.
AP009048 Genomic DNA. Translation: BAE78294.1.
PIRiS56528.
RefSeqiNP_418723.1. NC_000913.3.
WP_000118626.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77259; AAC77259; b4303.
BAE78294; BAE78294; BAE78294.
GeneIDi948834.
KEGGiecj:JW4265.
eco:b4303.
PATRICi32124192. VBIEscCol129921_4439.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97199.1.
U00096 Genomic DNA. Translation: AAC77259.1.
AP009048 Genomic DNA. Translation: BAE78294.1.
PIRiS56528.
RefSeqiNP_418723.1. NC_000913.3.
WP_000118626.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP39364.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261496. 10 interactions.
IntActiP39364. 1 interaction.
STRINGi511145.b4303.

Proteomic databases

PaxDbiP39364.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77259; AAC77259; b4303.
BAE78294; BAE78294; BAE78294.
GeneIDi948834.
KEGGiecj:JW4265.
eco:b4303.
PATRICi32124192. VBIEscCol129921_4439.

Organism-specific databases

EchoBASEiEB2443.
EcoGeneiEG12555. sgcQ.

Phylogenomic databases

eggNOGiENOG4106P19. Bacteria.
COG0434. LUCA.
HOGENOMiHOG000077119.
InParanoidiP39364.
KOiK06971.
OMAiENFFDAP.
OrthoDBiEOG66QKVZ.
PhylomeDBiP39364.

Enzyme and pathway databases

BioCyciEcoCyc:G7915-MONOMER.
ECOL316407:JW4265-MONOMER.

Miscellaneous databases

PROiP39364.

Family and domain databases

InterProiIPR005137. PSI_BtpA.
IPR011060. RibuloseP-bd_barrel.
[Graphical view]
PANTHERiPTHR21381. PTHR21381. 1 hit.
PfamiPF03437. BtpA. 1 hit.
[Graphical view]
PIRSFiPIRSF005956. BtpA. 1 hit.
ProDomiPD011184. PSI_BtpA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF51366. SSF51366. 1 hit.
TIGRFAMsiTIGR00259. thylakoid_BtpA. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes."
    Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.
    Nucleic Acids Res. 23:2105-2119(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. "Novel phosphotransferases system genes revealed by bacterial genome analysis: operons encoding homologues of sugar-specific permease domains of the phosphotransferase system and pentose catabolic enzymes."
    Reizer J., Charbit A., Reizer A., Saier M.H. Jr.
    Genome Sci. Technol. 1:53-75(1996)
    Cited for: DISCUSSION OF SEQUENCE.

Entry informationi

Entry nameiSGCQ_ECOLI
AccessioniPrimary (citable) accession number: P39364
Secondary accession number(s): Q2M612
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: July 6, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.