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Protein

Uncharacterized protein YjhG

Gene

yjhG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • xylonate dehydratase activity Source: EcoCyc

GO - Biological processi

  • aldonic acid catabolic process Source: EcoCyc
  • branched-chain amino acid biosynthetic process Source: GO_Central
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Enzyme and pathway databases

BioCyciEcoCyc:G7910-MONOMER.
ECOL316407:JW4259-MONOMER.
MetaCyc:G7910-MONOMER.
MetaCyc:MONOMER-18354.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjhG (EC:4.-.-.-)
Gene namesi
Name:yjhG
Ordered Locus Names:b4297, JW4259
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12549. yjhG.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 655655Uncharacterized protein YjhGPRO_0000103561Add
BLAST

Proteomic databases

PaxDbiP39358.
PRIDEiP39358.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
glmMP311201EBI-1127001,EBI-370683

Protein-protein interaction databases

BioGridi4260973. 10 interactions.
IntActiP39358. 4 interactions.
MINTiMINT-1250336.
STRINGi511145.b4297.

Structurei

3D structure databases

ProteinModelPortaliP39358.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the IlvD/Edd family.Curated

Phylogenomic databases

eggNOGiENOG4105C01. Bacteria.
COG0129. LUCA.
HOGENOMiHOG000173155.
OMAiQGMGKKV.
OrthoDBiEOG6HB9KR.
PhylomeDBiP39358.

Family and domain databases

InterProiIPR015928. Aconitase/3IPM_dehydase_swvl.
IPR017798. Dehydratase_YjhG/YagF.
IPR000581. DiOHA_6PGluconate_deHydtase.
IPR020558. DiOHA_6PGluconate_deHydtase_CS.
[Graphical view]
PANTHERiPTHR21000. PTHR21000. 1 hit.
PfamiPF00920. ILVD_EDD. 1 hit.
[Graphical view]
SUPFAMiSSF52016. SSF52016. 1 hit.
TIGRFAMsiTIGR03432. yjhG_yagF. 1 hit.
PROSITEiPS00886. ILVD_EDD_1. 1 hit.
PS00887. ILVD_EDD_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P39358-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVRNIFADE SHDIYTVRTH ADGPDGELPL TAEMLINRPS GDLFGMTMNA
60 70 80 90 100
GMGWSPDELD RDGILLLSTL GGLRGADGKP VALALHQGHY ELDIQMKAAA
110 120 130 140 150
EVIKANHALP YAVYVSDPCD GRTQGTTGMF DSLPYRNDAS MVMRRLIRSL
160 170 180 190 200
PDAKAVIGVA SCDKGLPATM MALAAQHNIA TVLVPGGATL PAKDGEDNGK
210 220 230 240 250
VQTIGARFAN GELSLQDARR AGCKACASSG GGCQFLGTAG TSQVVAEGLG
260 270 280 290 300
LAIPHSALAP SGEPVWREIA RASARAALNL SQKGITTREI LTDKAIENAM
310 320 330 340 350
TVHAAFGGST NLLLHIPAIA HQAGCHIPTV DDWIRINKRV PRLVSVLPNG
360 370 380 390 400
PVYHPTVNAF MAGGVPEVML HLRSLGLLHE DVMTVTGSTL KENLDWWEHS
410 420 430 440 450
ERRQRFKQLL LDQEQINADE VIMSPQQAKA RGLTSTITFP VGNIAPEGSV
460 470 480 490 500
IKSTAIDPSM IDEQGIYYHK GVAKVYLSEK SAIYDIKHDK IKAGDILVII
510 520 530 540 550
GVGPSGTGME ETYQVTSALK HLSYGKHVSL ITDARFSGVS TGACIGHVGP
560 570 580 590 600
EALAGGPIGK LRTGDLIEIK IDCRELHGEV NFLGTRSDEQ LPSQEEATAI
610 620 630 640 650
LNARPSHQDL LPDPELPDDT RLWAMLQAVS GGTWTGCIYD VNKIGAALRD

FMNKN
Length:655
Mass (Da):70,017
Last modified:July 15, 1998 - v2
Checksum:i95F88200CB6EF14C
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti555 – 5562GG → EA in AAA97193 (PubMed:7610040).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97193.1.
U00096 Genomic DNA. Translation: AAC77253.1.
AP009048 Genomic DNA. Translation: BAE78288.1.
PIRiC65243.
RefSeqiNP_418717.1. NC_000913.3.
WP_000116326.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77253; AAC77253; b4297.
BAE78288; BAE78288; BAE78288.
GeneIDi946829.
KEGGiecj:JW4259.
eco:b4297.
PATRICi32124180. VBIEscCol129921_4433.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97193.1.
U00096 Genomic DNA. Translation: AAC77253.1.
AP009048 Genomic DNA. Translation: BAE78288.1.
PIRiC65243.
RefSeqiNP_418717.1. NC_000913.3.
WP_000116326.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP39358.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260973. 10 interactions.
IntActiP39358. 4 interactions.
MINTiMINT-1250336.
STRINGi511145.b4297.

Proteomic databases

PaxDbiP39358.
PRIDEiP39358.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77253; AAC77253; b4297.
BAE78288; BAE78288; BAE78288.
GeneIDi946829.
KEGGiecj:JW4259.
eco:b4297.
PATRICi32124180. VBIEscCol129921_4433.

Organism-specific databases

EchoBASEiEB2437.
EcoGeneiEG12549. yjhG.

Phylogenomic databases

eggNOGiENOG4105C01. Bacteria.
COG0129. LUCA.
HOGENOMiHOG000173155.
OMAiQGMGKKV.
OrthoDBiEOG6HB9KR.
PhylomeDBiP39358.

Enzyme and pathway databases

BioCyciEcoCyc:G7910-MONOMER.
ECOL316407:JW4259-MONOMER.
MetaCyc:G7910-MONOMER.
MetaCyc:MONOMER-18354.

Miscellaneous databases

PROiP39358.

Family and domain databases

InterProiIPR015928. Aconitase/3IPM_dehydase_swvl.
IPR017798. Dehydratase_YjhG/YagF.
IPR000581. DiOHA_6PGluconate_deHydtase.
IPR020558. DiOHA_6PGluconate_deHydtase_CS.
[Graphical view]
PANTHERiPTHR21000. PTHR21000. 1 hit.
PfamiPF00920. ILVD_EDD. 1 hit.
[Graphical view]
SUPFAMiSSF52016. SSF52016. 1 hit.
TIGRFAMsiTIGR03432. yjhG_yagF. 1 hit.
PROSITEiPS00886. ILVD_EDD_1. 1 hit.
PS00887. ILVD_EDD_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes."
    Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.
    Nucleic Acids Res. 23:2105-2119(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], SEQUENCE REVISION TO 555-556.
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYJHG_ECOLI
AccessioniPrimary (citable) accession number: P39358
Secondary accession number(s): Q2M618
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: July 15, 1998
Last modified: January 20, 2016
This is version 112 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.