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Protein

Uncharacterized permease YjhF

Gene

yjhF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciEcoCyc:YJHF-MONOMER.
ECOL316407:JW4258-MONOMER.

Protein family/group databases

TCDBi2.A.8.1.11. the gluconate:h(+) symporter (gntp) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized permease YjhF
Gene namesi
Name:yjhF
Ordered Locus Names:b4296, JW4258
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12548. yjhF.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei2 – 22HelicalSequence analysisAdd BLAST21
Transmembranei24 – 44HelicalSequence analysisAdd BLAST21
Transmembranei52 – 72HelicalSequence analysisAdd BLAST21
Transmembranei106 – 126HelicalSequence analysisAdd BLAST21
Transmembranei134 – 154HelicalSequence analysisAdd BLAST21
Transmembranei173 – 193HelicalSequence analysisAdd BLAST21
Transmembranei228 – 248HelicalSequence analysisAdd BLAST21
Transmembranei265 – 285HelicalSequence analysisAdd BLAST21
Transmembranei302 – 322HelicalSequence analysisAdd BLAST21
Transmembranei337 – 357HelicalSequence analysisAdd BLAST21
Transmembranei361 – 381HelicalSequence analysisAdd BLAST21
Transmembranei429 – 449HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

  • integral component of plasma membrane Source: GO_Central
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000619441 – 449Uncharacterized permease YjhFAdd BLAST449

Proteomic databases

PaxDbiP39357.
PRIDEiP39357.

Interactioni

Protein-protein interaction databases

BioGridi4260974. 162 interactors.
STRINGi511145.b4296.

Structurei

3D structure databases

ProteinModelPortaliP39357.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GntP permease family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105C6Z. Bacteria.
COG2610. LUCA.
HOGENOMiHOG000237115.
InParanoidiP39357.
KOiK03299.
OMAiVYPKVYR.
PhylomeDBiP39357.

Family and domain databases

InterProiIPR003474. Glcn_transporter.
[Graphical view]
PfamiPF02447. GntP_permease. 1 hit.
[Graphical view]
PIRSFiPIRSF002746. Gluconate_transporter. 1 hit.
TIGRFAMsiTIGR00791. gntP. 1 hit.

Sequencei

Sequence statusi: Complete.

P39357-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLIIVVAGI ALLLLLTIKI KLNTFVSLII VSIAVAIASG MDLSKVVTSV
60 70 80 90 100
ESGLGGTLGH IGLIFGFGVM LGRLLADAGG AQRIALTMLN YFGKNKLDWA
110 120 130 140 150
VVCSAFIVGI ALFFEVGLIL LVPILFAIAR EAKISPMFMC VPMLSGLLVA
160 170 180 190 200
HGFLPPHPGP TVIAREYGAD VGLVLIYGII VGIPTFILCG PVLNKFCQRI
210 220 230 240 250
IPDAFKKEGN IASLGATRRF SESEMPGFGI SFLTAMLPVI LMAVVTIIQM
260 270 280 290 300
THAKSAADSG LFYNVILFLG NSTIAMLISL LFAIYTMGLG RGKTIPDLMD
310 320 330 340 350
SCGKAIAGIA GLLLIIGGGG AFKQVLIDSG VGQYISTLVS GMDINPILMA
360 370 380 390 400
WGVAAFLRIC LGSATVAAIS TAGLVIPLLA VHPNTNLALI TLATGAGSCI
410 420 430 440
CSHVNDASFW MIKDFFGLTT KETLLSWTLM STLLSISGLI FILLASLVL
Length:449
Mass (Da):47,004
Last modified:July 15, 1998 - v2
Checksum:iF458D02904C8A267
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97192.1. Frameshift.
U00096 Genomic DNA. Translation: AAC77252.1.
AP009048 Genomic DNA. Translation: BAE78287.1.
PIRiB65243.
RefSeqiNP_418716.1. NC_000913.3.
WP_001128363.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77252; AAC77252; b4296.
BAE78287; BAE78287; BAE78287.
GeneIDi949102.
KEGGiecj:JW4258.
eco:b4296.
PATRICi32124178. VBIEscCol129921_4432.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97192.1. Frameshift.
U00096 Genomic DNA. Translation: AAC77252.1.
AP009048 Genomic DNA. Translation: BAE78287.1.
PIRiB65243.
RefSeqiNP_418716.1. NC_000913.3.
WP_001128363.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP39357.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260974. 162 interactors.
STRINGi511145.b4296.

Protein family/group databases

TCDBi2.A.8.1.11. the gluconate:h(+) symporter (gntp) family.

Proteomic databases

PaxDbiP39357.
PRIDEiP39357.

Protocols and materials databases

DNASUi949102.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77252; AAC77252; b4296.
BAE78287; BAE78287; BAE78287.
GeneIDi949102.
KEGGiecj:JW4258.
eco:b4296.
PATRICi32124178. VBIEscCol129921_4432.

Organism-specific databases

EchoBASEiEB2436.
EcoGeneiEG12548. yjhF.

Phylogenomic databases

eggNOGiENOG4105C6Z. Bacteria.
COG2610. LUCA.
HOGENOMiHOG000237115.
InParanoidiP39357.
KOiK03299.
OMAiVYPKVYR.
PhylomeDBiP39357.

Enzyme and pathway databases

BioCyciEcoCyc:YJHF-MONOMER.
ECOL316407:JW4258-MONOMER.

Miscellaneous databases

PROiP39357.

Family and domain databases

InterProiIPR003474. Glcn_transporter.
[Graphical view]
PfamiPF02447. GntP_permease. 1 hit.
[Graphical view]
PIRSFiPIRSF002746. Gluconate_transporter. 1 hit.
TIGRFAMsiTIGR00791. gntP. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYJHF_ECOLI
AccessioniPrimary (citable) accession number: P39357
Secondary accession number(s): Q2M619
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: July 15, 1998
Last modified: November 2, 2016
This is version 113 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.