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Protein

Uncharacterized transcriptional regulator YjhU

Gene

yjhU

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi72 – 91H-T-H motifSequence analysisAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:G7909-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized transcriptional regulator YjhU
Gene namesi
Name:yjhU
Ordered Locus Names:b4295, JW5952
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12604 yjhU

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000627911 – 328Uncharacterized transcriptional regulator YjhUAdd BLAST328

Proteomic databases

PaxDbiP39356
PRIDEiP39356

Interactioni

Protein-protein interaction databases

BioGridi4260975, 20 interactors
DIPiDIP-12629N
STRINGi316385.ECDH10B_4496

Structurei

3D structure databases

ProteinModelPortaliP39356
SMRiP39356
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105DKT Bacteria
COG2390 LUCA
HOGENOMiHOG000054887
InParanoidiP39356
OMAiGAPYSYR
PhylomeDBiP39356

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR037171 NagB/RpiA_transferase-like
IPR013324 RNA_pol_sigma_r3/r4-like
IPR007324 Sugar-bd_dom_put
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF04198 Sugar-bind, 1 hit
SUPFAMiSSF100950 SSF100950, 1 hit
SSF88659 SSF88659, 1 hit

Sequencei

Sequence statusi: Complete.

P39356-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDRDQTNSSL FNDDPVLHAT WLYYQEGKSQ TEVAAIMGVS RVTVVKYLQT
60 70 80 90 100
ARENGLVHIN LDVNVFGSID AALQIRDKFN LQRVIIVPDG EHAGKRDDTK
110 120 130 140 150
LMRTRLSRAG GMYLNQVIEN GDVLGVAWGR TIHQMSKTMT PKSCKNVTVI
160 170 180 190 200
QMLGSMPSQP DLTIIESSSQ IAYKLSGRVA SLHVPAVVSS ARLAMELQAE
210 220 230 240 250
PIIRSNFDVL TRCTKAFFVV GNALDENPLI RVGVLNKKEM QTYRDLGAVG
260 270 280 290 300
VICGRFYDKE GMPVVADVDQ RILGISLAQL RQIERKIFLA GGERGYDATL
310 320
GALLGGYVTD LIVDEGTAEF LLACELPH
Length:328
Mass (Da):36,112
Last modified:June 27, 2006 - v2
Checksum:iDA6291ED2DE125CD
GO

Sequence cautioni

The sequence AAA97191 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA Translation: AAA97191.1 Different initiation.
U00096 Genomic DNA Translation: AAC77251.2
AP009048 Genomic DNA Translation: BAE78286.1
PIRiS56520
RefSeqiNP_418715.2, NC_000913.3
WP_000373366.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC77251; AAC77251; b4295
BAE78286; BAE78286; BAE78286
GeneIDi948827
KEGGiecj:JW5952
eco:b4295
PATRICifig|1411691.4.peg.2403

Similar proteinsi

Entry informationi

Entry nameiYJHU_ECOLI
AccessioniPrimary (citable) accession number: P39356
Secondary accession number(s): Q2M620
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: June 27, 2006
Last modified: May 23, 2018
This is version 127 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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