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Protein

Uncharacterized protein YjfM

Gene

yjfM

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7850-MONOMER.
ECOL316407:JW4143-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjfM
Gene namesi
Name:yjfM
Ordered Locus Names:b4185, JW4143
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12488. yjfM.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001697521 – 212Uncharacterized protein YjfMAdd BLAST212

Proteomic databases

PaxDbiP39295.
PRIDEiP39295.

Interactioni

Protein-protein interaction databases

BioGridi4262707. 207 interactors.
IntActiP39295. 2 interactors.
STRINGi511145.b4185.

Structurei

3D structure databases

ProteinModelPortaliP39295.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108KXT. Bacteria.
COG5463. LUCA.
HOGENOMiHOG000127353.
OMAiACSTAYG.

Family and domain databases

InterProiIPR009576. Biofilm_formation_YgiB.
[Graphical view]
PfamiPF06693. DUF1190. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P39295-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARKRKSRNN SKIGHGAISR IGRPNNPFEP CRNRYAQKYL TLALMGGAAF
60 70 80 90 100
FVLKGCSDSS DVDNDGDGTF YATVQDCIDD GNNADICARG WNNAKTAFYA
110 120 130 140 150
DVPKNMTQQN CQSKYENCYY DNVEQSWIPV VSGFLLSRVI RKDRDEPFVY
160 170 180 190 200
NSGGSSFASR PVWRSTSGDY SWRSGSGKKE SYSSGGFTTK KASTVSRGGY
210
GRSSSARGHW GG
Length:212
Mass (Da):23,352
Last modified:February 1, 1995 - v1
Checksum:i0C69332DA15AEAE4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97081.1.
U00096 Genomic DNA. Translation: AAC77142.1.
AP009048 Genomic DNA. Translation: BAE78186.1.
PIRiS56410.
RefSeqiNP_418606.1. NC_000913.3.
WP_000101658.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77142; AAC77142; b4185.
BAE78186; BAE78186; BAE78186.
GeneIDi948700.
KEGGiecj:JW4143.
eco:b4185.
PATRICi32123945. VBIEscCol129921_4317.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97081.1.
U00096 Genomic DNA. Translation: AAC77142.1.
AP009048 Genomic DNA. Translation: BAE78186.1.
PIRiS56410.
RefSeqiNP_418606.1. NC_000913.3.
WP_000101658.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP39295.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262707. 207 interactors.
IntActiP39295. 2 interactors.
STRINGi511145.b4185.

Proteomic databases

PaxDbiP39295.
PRIDEiP39295.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77142; AAC77142; b4185.
BAE78186; BAE78186; BAE78186.
GeneIDi948700.
KEGGiecj:JW4143.
eco:b4185.
PATRICi32123945. VBIEscCol129921_4317.

Organism-specific databases

EchoBASEiEB2381.
EcoGeneiEG12488. yjfM.

Phylogenomic databases

eggNOGiENOG4108KXT. Bacteria.
COG5463. LUCA.
HOGENOMiHOG000127353.
OMAiACSTAYG.

Enzyme and pathway databases

BioCyciEcoCyc:G7850-MONOMER.
ECOL316407:JW4143-MONOMER.

Miscellaneous databases

PROiP39295.

Family and domain databases

InterProiIPR009576. Biofilm_formation_YgiB.
[Graphical view]
PfamiPF06693. DUF1190. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYJFM_ECOLI
AccessioniPrimary (citable) accession number: P39295
Secondary accession number(s): Q2M6C0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: November 2, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.