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Protein

Uncharacterized protein YjdJ

Gene

yjdJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7829-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjdJ
Gene namesi
Name:yjdJ
Ordered Locus Names:b4127, JW4088
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi

Organism-specific databases

EcoGeneiEG12467 yjdJ

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001697321 – 90Uncharacterized protein YjdJAdd BLAST90

Proteomic databases

PaxDbiP39274
PRIDEiP39274

Interactioni

Protein-protein interaction databases

BioGridi4261769, 19 interactors
DIPiDIP-12566N
IntActiP39274, 3 interactors
STRINGi316385.ECDH10B_4319

Structurei

Secondary structure

190
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi4 – 6Combined sources3
Beta strandi9 – 13Combined sources5
Beta strandi19 – 28Combined sources10
Turni29 – 31Combined sources3
Beta strandi32 – 40Combined sources9
Helixi42 – 44Combined sources3
Helixi49 – 63Combined sources15
Beta strandi67 – 69Combined sources3
Helixi73 – 81Combined sources9
Helixi83 – 88Combined sources6

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5I0CX-ray1.92A1-90[»]
ProteinModelPortaliP39274
SMRiP39274
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 90N-acetyltransferasePROSITE-ProRule annotationAdd BLAST89

Phylogenomic databases

eggNOGiENOG410830R Bacteria
COG2388 LUCA
HOGENOMiHOG000167986
InParanoidiP39274
KOiK06975
OMAiNRKIIPL
PhylomeDBiP39274

Family and domain databases

InterProiView protein in InterPro
IPR016181 Acyl_CoA_acyltransferase
IPR031165 GNAT_YJDJ
PfamiView protein in Pfam
PF14542 Acetyltransf_CG, 1 hit
SUPFAMiSSF55729 SSF55729, 1 hit
PROSITEiView protein in PROSITE
PS51729 GNAT_YJDJ, 1 hit

Sequencei

Sequence statusi: Complete.

P39274-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEIREGHNKF YINDKQGKQI AEIVFVPTGE NLAIIEHTDV DESLKGQGIG
60 70 80 90
KQLVAKVVEK MRREKRKIIP LCPFAKHEFD KTREYDDIRS
Length:90
Mass (Da):10,468
Last modified:February 1, 1995 - v1
Checksum:i3A8FC370AACC06A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA Translation: AAA97027.1
U00096 Genomic DNA Translation: AAC77088.1
AP009048 Genomic DNA Translation: BAE78129.1
PIRiS56356
RefSeqiNP_418551.1, NC_000913.3
WP_000405651.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC77088; AAC77088; b4127
BAE78129; BAE78129; BAE78129
GeneIDi948647
KEGGiecj:JW4088
eco:b4127
PATRICifig|1411691.4.peg.2573

Entry informationi

Entry nameiYJDJ_ECOLI
AccessioniPrimary (citable) accession number: P39274
Secondary accession number(s): Q2M6H7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: March 28, 2018
This is version 119 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

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