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Protein

Fimbrin-like protein FimI

Gene

fimI

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  • cell adhesion Source: InterPro
  • pilus assembly Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG11974-MONOMER.
ECOL316407:JW5779-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Fimbrin-like protein FimI
Gene namesi
Name:fimI
Ordered Locus Names:b4315, JW5779
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11974. fimI.

Subcellular locationi

GO - Cellular componenti

  • pilus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Fimbrium

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 179160Fimbrin-like protein FimIPRO_0000009249Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi43 ↔ 83By similarity

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiP39264.
PRIDEiP39264.

Interactioni

Protein-protein interaction databases

BioGridi4262747. 4 interactions.
DIPiDIP-9617N.
IntActiP39264. 1 interaction.
MINTiMINT-1256126.
STRINGi511145.b4315.

Structurei

3D structure databases

ProteinModelPortaliP39264.
SMRiP39264. Positions 25-179.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the fimbrial protein family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108S54. Bacteria.
COG3539. LUCA.
HOGENOMiHOG000260127.
InParanoidiP39264.
KOiK07351.
OMAiDCSTAVS.
OrthoDBiEOG63VC1D.
PhylomeDBiP39264.

Family and domain databases

Gene3Di2.60.40.1090. 1 hit.
InterProiIPR008966. Adhesion_dom.
IPR000259. Adhesion_dom_fimbrial.
[Graphical view]
PfamiPF00419. Fimbrial. 1 hit.
[Graphical view]
SUPFAMiSSF49401. SSF49401. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P39264-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRKRLFLLA SLLPMFALAG NKWNTTLPGG NMQFQGVIIA ETCRIEAGDK
60 70 80 90 100
QMTVNMGQIS SNRFHAVGED SAPVPFVIHL RECSTVVSER VGVAFHGVAD
110 120 130 140 150
GKNPDVLSVG EGPGIATNIG VALFDDEGNL VPINRPPANW KRLYSGSTSL
160 170
HFIAKYRATG RRVTGGIANA QAWFSLTYQ
Length:179
Mass (Da):19,373
Last modified:January 23, 2002 - v2
Checksum:iECE4FA7D24B85E25
GO

Sequence cautioni

The sequence AAA97211.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated
The sequence X00981 differs from that shown. Reason: Frameshift at positions 69 and 74. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti13 – 131L → P in X00981 (PubMed:6147250).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97211.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77271.2.
AP009048 Genomic DNA. Translation: BAE78308.1.
X00981 Genomic DNA. No translation available.
RefSeqiNP_418735.2. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC77271; AAC77271; b4315.
BAE78308; BAE78308; BAE78308.
GeneIDi948841.
KEGGiecj:JW5779.
eco:b4315.
PATRICi32124226. VBIEscCol129921_4456.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97211.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77271.2.
AP009048 Genomic DNA. Translation: BAE78308.1.
X00981 Genomic DNA. No translation available.
RefSeqiNP_418735.2. NC_000913.3.

3D structure databases

ProteinModelPortaliP39264.
SMRiP39264. Positions 25-179.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262747. 4 interactions.
DIPiDIP-9617N.
IntActiP39264. 1 interaction.
MINTiMINT-1256126.
STRINGi511145.b4315.

Proteomic databases

PaxDbiP39264.
PRIDEiP39264.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77271; AAC77271; b4315.
BAE78308; BAE78308; BAE78308.
GeneIDi948841.
KEGGiecj:JW5779.
eco:b4315.
PATRICi32124226. VBIEscCol129921_4456.

Organism-specific databases

EchoBASEiEB1917.
EcoGeneiEG11974. fimI.

Phylogenomic databases

eggNOGiENOG4108S54. Bacteria.
COG3539. LUCA.
HOGENOMiHOG000260127.
InParanoidiP39264.
KOiK07351.
OMAiDCSTAVS.
OrthoDBiEOG63VC1D.
PhylomeDBiP39264.

Enzyme and pathway databases

BioCyciEcoCyc:EG11974-MONOMER.
ECOL316407:JW5779-MONOMER.

Miscellaneous databases

PROiP39264.

Family and domain databases

Gene3Di2.60.40.1090. 1 hit.
InterProiIPR008966. Adhesion_dom.
IPR000259. Adhesion_dom_fimbrial.
[Graphical view]
PfamiPF00419. Fimbrial. 1 hit.
[Graphical view]
SUPFAMiSSF49401. SSF49401. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes."
    Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.
    Nucleic Acids Res. 23:2105-2119(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. "The fimA gene encoding the type-1 fimbrial subunit of Escherichia coli. Nucleotide sequence and primary structure of the protein."
    Klemm P.
    Eur. J. Biochem. 143:395-399(1984) [PubMed] [Europe PMC] [Abstract]
    Cited for: PRELIMINARY NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-80.

Entry informationi

Entry nameiFIMI_ECOLI
AccessioniPrimary (citable) accession number: P39264
Secondary accession number(s): Q2M5Z8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: January 23, 2002
Last modified: January 20, 2016
This is version 113 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.