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Protein

Putative uncharacterized protein YabP

Gene

yabP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG12610-MONOMER.
ECOL316407:JW0055-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YabP
Gene namesi
Name:yabP
Ordered Locus Names:b4659, JW0055
ORF Names:b0056
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12610. yabP.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 216216Putative uncharacterized protein YabPPRO_0000168523Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi4261615. 6 interactions.
IntActiP39220. 4 interactions.
STRINGi316407.85674305.

Structurei

3D structure databases

ProteinModelPortaliP39220.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000078289.
OMAiGWNANLD.

Sequencei

Sequence statusi: Complete.

P39220-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVSVPGMPV TLLNMSKNDI YKMVSGDKMD VKMNIFQRLW ETLRHLFWSD
60 70 80 90 100
KQTEAYKLLF NFVNNQTGNI NASEYFTGAI NENEREKFIN SLELFNKLKT
110 120 130 140 150
CAKNPDELVA KGNMRWVAQT FGDIELSVTF FIEKNKICTQ TLQLHKGQGN
160 170 180 190 200
LGVDLRKAYL PGVDMRDCYL GKKTMKGSND ILYERPGWNA NLGVLPRTVL
210
PRTVLTRTVL TWTVLP
Length:216
Mass (Da):24,791
Last modified:November 1, 1997 - v2
Checksum:iA15D252E84B50621
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAB96624.2.
PIRiH64726.

Genome annotation databases

EnsemblBacteriaiBAB96624; BAB96624; BAB96624.
KEGGiecj:JW0055.
PATRICi48659292. VBIEscCol107702_0052.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAB96624.2.
PIRiH64726.

3D structure databases

ProteinModelPortaliP39220.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261615. 6 interactions.
IntActiP39220. 4 interactions.
STRINGi316407.85674305.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB96624; BAB96624; BAB96624.
KEGGiecj:JW0055.
PATRICi48659292. VBIEscCol107702_0052.

Organism-specific databases

EchoBASEiEB2494.
EcoGeneiEG12610. yabP.

Phylogenomic databases

HOGENOMiHOG000078289.
OMAiGWNANLD.

Enzyme and pathway databases

BioCyciEcoCyc:EG12610-MONOMER.
ECOL316407:JW0055-MONOMER.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region."
    Yura T., Mori H., Nagai H., Nagata T., Ishihama A., Fujita N., Isono K., Mizobuchi K., Nakata A.
    Nucleic Acids Res. 20:3305-3308(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. Rudd K.E.
    Unpublished observations (NOV-1994)
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiYABP_ECOLI
AccessioniPrimary (citable) accession number: P39220
Secondary accession number(s): P75632, Q8KJP8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: November 1, 1997
Last modified: January 20, 2016
This is version 86 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.