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P39216

- TLPA_BACSU

UniProt

P39216 - TLPA_BACSU

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Protein

Methyl-accepting chemotaxis protein TlpA

Gene

tlpA

Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. All amino acids serve as attractants in B.subtilis, they appear to cause an increase in the turnover methyl groups, leading to methylation of an unidentified acceptor, while repellents have been shown to cause a decrease in methyl group turnover. The methyl groups are added by a methyltransferase and removed by a methylesterase.

GO - Molecular functioni

  1. transmembrane signaling receptor activity Source: InterPro

GO - Biological processi

  1. chemotaxis Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Transducer

Keywords - Biological processi

Chemotaxis

Enzyme and pathway databases

BioCyciBSUB:BSU31250-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Methyl-accepting chemotaxis protein TlpA
Gene namesi
Name:tlpA
Ordered Locus Names:BSU31250
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570: Chromosome

Organism-specific databases

GenoListiBSU31250. [Micado]

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 1616CytoplasmicSequence AnalysisAdd
BLAST
Transmembranei17 – 3721HelicalSequence AnalysisAdd
BLAST
Topological domaini38 – 281244ExtracellularSequence AnalysisAdd
BLAST
Transmembranei282 – 30221HelicalSequence AnalysisAdd
BLAST
Topological domaini303 – 662360CytoplasmicSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 662662Methyl-accepting chemotaxis protein TlpAPRO_0000110559Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei370 – 3701Glutamate methyl ester (Glu)By similarity
Modified residuei594 – 5941Glutamate methyl ester (Glu)By similarity
Modified residuei629 – 6291Glutamate methyl ester (Glu)By similarity
Modified residuei636 – 6361Glutamate methyl ester (Glu)By similarity

Keywords - PTMi

Methylation

Proteomic databases

PaxDbiP39216.

Interactioni

Protein-protein interaction databases

IntActiP39216. 17 interactions.
STRINGi224308.BSU31250.

Structurei

3D structure databases

ProteinModelPortaliP39216.
SMRiP39216. Positions 302-355, 379-659.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini152 – 22877CacheAdd
BLAST
Domaini303 – 35553HAMPPROSITE-ProRule annotationAdd
BLAST
Domaini374 – 610237Methyl-accepting transducerPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 cache domain.Curated
Contains 1 HAMP domain.PROSITE-ProRule annotation
Contains 1 methyl-accepting transducer domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000083278.
InParanoidiP39216.
KOiK03406.
OMAiLERDWYK.
OrthoDBiEOG67HJTT.
PhylomeDBiP39216.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00319. TarH. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P39216-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKKTLTTIRR SSIARRLIIS FLLILIVPIT ALSVSAYQSA VASLDVQMTQ
60 70 80 90 100
SAKENVQILD HIIDDKISTT EKSLAYFSDW ATAEKFQDKK KTELKQEFKQ
110 120 130 140 150
FIQMNDNVAA VFSSGKDGDF TRYPYADMPS DFNALERDWY KEAMANKGKT
160 170 180 190 200
IVTEPYESIS SGKMVVTIAR QTVDGSGVVA IDMKIDDLVT TAKGINIGKE
210 220 230 240 250
GYAFILSQNK KVIAYSGEKA GTELKGDWVD KLYKDKSGDF EYTYKGKKKK
260 270 280 290 300
MAFATSQTTG WKISGTMYAN EIHDAASRVL IMASIVLAIA IGAGMTAIYF
310 320 330 340 350
VIRSITKPLR RIVASAEKIS EGDLTETIEI NSKDELGVLS ESFNHMAHSL
360 370 380 390 400
RSLIHGIKDS VEHVASSSEE LTASADQTSR ATEHITMAIE QFSNGSESQS
410 420 430 440 450
EKIETTTEQI NEMNDGLAEL ARAAAVITET SADSTEVSSK GETLVQKTAG
460 470 480 490 500
QMNTIDHSVK AAEQVVKGLE IKSKDITNIL RVINGIADQT NLLALNAAIE
510 520 530 540 550
AARAGEYGRG FSVVAEEVRK LAVQSADSAK EIESLISEIV KEIHTSLNVL
560 570 580 590 600
QSVNKEVETG LVMTDETKQS FKHISQMTNQ IASELQNMNA TVEELSAGAQ
610 620 630 640 650
EISAASNDIT AISKESSDGI QDIAASAEEQ LASMEEISSS ALTLERMSEE
660
LRDLTKQFKV DK
Length:662
Mass (Da):72,278
Last modified:February 1, 1995 - v1
Checksum:i7335B27992D07FF6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L29189 Genomic DNA. Translation: AAA20555.1.
AL009126 Genomic DNA. Translation: CAB15103.1.
PIRiC54078.
RefSeqiNP_391003.1. NC_000964.3.
WP_003243846.1. NZ_CM000487.1.

Genome annotation databases

EnsemblBacteriaiCAB15103; CAB15103; BSU31250.
GeneIDi938840.
KEGGibsu:BSU31250.
PATRICi18978208. VBIBacSub10457_3267.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L29189 Genomic DNA. Translation: AAA20555.1 .
AL009126 Genomic DNA. Translation: CAB15103.1 .
PIRi C54078.
RefSeqi NP_391003.1. NC_000964.3.
WP_003243846.1. NZ_CM000487.1.

3D structure databases

ProteinModelPortali P39216.
SMRi P39216. Positions 302-355, 379-659.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P39216. 17 interactions.
STRINGi 224308.BSU31250.

Proteomic databases

PaxDbi P39216.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB15103 ; CAB15103 ; BSU31250 .
GeneIDi 938840.
KEGGi bsu:BSU31250.
PATRICi 18978208. VBIBacSub10457_3267.

Organism-specific databases

GenoListi BSU31250. [Micado ]

Phylogenomic databases

eggNOGi COG0840.
HOGENOMi HOG000083278.
InParanoidi P39216.
KOi K03406.
OMAi LERDWYK.
OrthoDBi EOG67HJTT.
PhylomeDBi P39216.

Enzyme and pathway databases

BioCyci BSUB:BSU31250-MONOMER.

Family and domain databases

InterProi IPR004010. Cache_domain.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view ]
Pfami PF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view ]
SMARTi SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00319. TarH. 1 hit.
[Graphical view ]
SUPFAMi SSF103190. SSF103190. 1 hit.
PROSITEi PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and characterization of genes encoding methyl-accepting chemotaxis proteins in Bacillus subtilis."
    Hanlon D.W., Ordal G.W.
    J. Biol. Chem. 269:14038-14046(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168 / OI1085.
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.

Entry informationi

Entry nameiTLPA_BACSU
AccessioniPrimary (citable) accession number: P39216
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: October 29, 2014
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3