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Protein

Xylulose kinase

Gene

xylB

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + D-xylulose = ADP + D-xylulose 5-phosphate.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Kinase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Xylose metabolism

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciBSUB:BSU17610-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylulose kinase (EC:2.7.1.17)
Short name:
Xylulokinase
Gene namesi
Name:xylB
Synonyms:yncA
Ordered Locus Names:BSU17610
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570 Componenti: Chromosome

Organism-specific databases

GenoListiBSU17610. [Micado]

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 499499Xylulose kinasePRO_0000059548Add
BLAST

Proteomic databases

PaxDbiP39211.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100009691.

Structurei

3D structure databases

ProteinModelPortaliP39211.
SMRiP39211. Positions 4-491.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FGGY kinase family.Curated

Phylogenomic databases

eggNOGiCOG1070.
HOGENOMiHOG000222138.
InParanoidiP39211.
KOiK00854.
OMAiHMPALFE.
OrthoDBiEOG6S52KR.
PhylomeDBiP39211.

Family and domain databases

InterProiIPR000577. Carb_kinase_FGGY.
IPR018485. Carb_kinase_FGGY_C.
IPR018483. Carb_kinase_FGGY_CS.
IPR018484. Carb_kinase_FGGY_N.
IPR006000. Xylulokinase.
[Graphical view]
PfamiPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000538. GlpK. 1 hit.
TIGRFAMsiTIGR01312. XylB. 1 hit.
PROSITEiPS00933. FGGY_KINASES_1. 1 hit.
PS00445. FGGY_KINASES_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P39211-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYVIGIDLG TSAVKTILVN QNGKVCAETS KRYPLIQEKA GYSEQNPEDW
60 70 80 90 100
VQQTIEALAE LVSISNVQAK DIDGISYSGQ MHGLVLLDQD RQVLRNAILW
110 120 130 140 150
NDTRTTPQCI RMTEKFGDHL LDITKNRVLE GFTLPKMLWV KEHEPELFKK
160 170 180 190 200
TAVFLLPKDY VRFRMTGVIH TEYSDAAGTL LLHITRKEWS NDICNQIGIS
210 220 230 240 250
ADICPPLVES HDCVGSLLPH VAAKTGLLEK TKVYAGGADN ACGAIGAGIL
260 270 280 290 300
SSGKTLCSIG TSGVILSYEE EKERDFKGKV HFFNHGKKDS FYTMGVTLAA
310 320 330 340 350
GYSLDWFKRT FAPNESFEQL LQGVEAIPIG ANGLLYTPYL VGERTPHADS
360 370 380 390 400
SIRGSLIGMD GAHNRKHFLR AIMEGITFSL HESIELFREA GKSVHTVVSI
410 420 430 440 450
GGGAKNDTWL QMQADIFNTR VIKLENEQGP AMGAAMLAAF GSGWFESLEE
460 470 480 490
CAEQFIREAA AFYPKAQNVQ KYKTLFDLYK NIYTHTKDLN TALKSFRKN
Length:499
Mass (Da):55,417
Last modified:November 1, 1997 - v2
Checksum:i0772B7F6701E5B6E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U66480 Genomic DNA. Translation: AAB41094.1.
AL009126 Genomic DNA. Translation: CAB13645.1.
X02795 Genomic DNA. Translation: CAA26563.1.
PIRiD69735.
RefSeqiNP_389643.1. NC_000964.3.
WP_003245233.1. NZ_JNCM01000035.1.

Genome annotation databases

EnsemblBacteriaiCAB13645; CAB13645; BSU17610.
GeneIDi939560.
KEGGibsu:BSU17610.
PATRICi18975337. VBIBacSub10457_1860.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U66480 Genomic DNA. Translation: AAB41094.1.
AL009126 Genomic DNA. Translation: CAB13645.1.
X02795 Genomic DNA. Translation: CAA26563.1.
PIRiD69735.
RefSeqiNP_389643.1. NC_000964.3.
WP_003245233.1. NZ_JNCM01000035.1.

3D structure databases

ProteinModelPortaliP39211.
SMRiP39211. Positions 4-491.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100009691.

Proteomic databases

PaxDbiP39211.

Protocols and materials databases

DNASUi939560.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB13645; CAB13645; BSU17610.
GeneIDi939560.
KEGGibsu:BSU17610.
PATRICi18975337. VBIBacSub10457_1860.

Organism-specific databases

GenoListiBSU17610. [Micado]

Phylogenomic databases

eggNOGiCOG1070.
HOGENOMiHOG000222138.
InParanoidiP39211.
KOiK00854.
OMAiHMPALFE.
OrthoDBiEOG6S52KR.
PhylomeDBiP39211.

Enzyme and pathway databases

BioCyciBSUB:BSU17610-MONOMER.

Family and domain databases

InterProiIPR000577. Carb_kinase_FGGY.
IPR018485. Carb_kinase_FGGY_C.
IPR018483. Carb_kinase_FGGY_CS.
IPR018484. Carb_kinase_FGGY_N.
IPR006000. Xylulokinase.
[Graphical view]
PfamiPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000538. GlpK. 1 hit.
TIGRFAMsiTIGR01312. XylB. 1 hit.
PROSITEiPS00933. FGGY_KINASES_1. 1 hit.
PS00445. FGGY_KINASES_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequencing of a 26 kb region of the Bacillus subtilis genome downstream of spoVJ."
    Borchert S., Klein C., Piksa B., Hammelmann M., Entian K.-D.
    Submitted (FEB-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  3. "Nucleotide sequence of the Bacillus subtilis xylose isomerase gene: extensive homology between the Bacillus and Escherichia coli enzyme."
    Wilhelm M., Hollenberg C.P.
    Nucleic Acids Res. 13:5717-5722(1985) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-8.

Entry informationi

Entry nameiXYLB_BACSU
AccessioniPrimary (citable) accession number: P39211
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: November 1, 1997
Last modified: July 22, 2015
This is version 98 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.