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Protein

60S ribosomal protein L36

Gene

Rpl36

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L36
Gene namesi
Name:Rpl36
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi62085. Rpl36.

Subcellular locationi

GO - Cellular componenti

  • cytosolic large ribosomal subunit Source: RGD
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemoved1 Publication
Chaini2 – 10510460S ribosomal protein L36PRO_0000195009Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei62 – 621N6-acetyllysineBy similarity

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiP39032.
PRIDEiP39032.

PTM databases

iPTMnetiP39032.
PhosphoSiteiP39032.

Interactioni

Protein-protein interaction databases

MINTiMINT-4571527.
STRINGi10116.ENSRNOP00000058934.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L36e family.Curated

Phylogenomic databases

eggNOGiKOG3452. Eukaryota.
COG5051. LUCA.
HOGENOMiHOG000155312.
HOVERGENiHBG002152.
InParanoidiP39032.
KOiK02920.
OrthoDBiEOG7FV3T1.
PhylomeDBiP39032.

Family and domain databases

InterProiIPR000509. Ribosomal_L36e.
[Graphical view]
PANTHERiPTHR10114. PTHR10114. 1 hit.
PfamiPF01158. Ribosomal_L36e. 1 hit.
[Graphical view]
PROSITEiPS01190. RIBOSOMAL_L36E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P39032-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALRYPMAVG LNKGHKVTKN VSKPRHSRRR GRLTKHTKFV RDMIREVCAF
60 70 80 90 100
APYERRAMEL LKVSKDKRAL KFIKKRVGTH IRAKRKREEL SNVLAAMRKA

AAKKD
Length:105
Mass (Da):12,268
Last modified:January 23, 2007 - v2
Checksum:iF8EE850C64080EB3
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti49 – 491A → G in AAH58475 (PubMed:15489334).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X68284 mRNA. Translation: CAA48345.1.
BC058475 mRNA. Translation: AAH58475.1.
PIRiJN0483.
RefSeqiNP_071949.1. NM_022504.1.
UniGeneiRn.1439.

Genome annotation databases

GeneIDi58927.
KEGGirno:58927.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X68284 mRNA. Translation: CAA48345.1.
BC058475 mRNA. Translation: AAH58475.1.
PIRiJN0483.
RefSeqiNP_071949.1. NM_022504.1.
UniGeneiRn.1439.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4571527.
STRINGi10116.ENSRNOP00000058934.

PTM databases

iPTMnetiP39032.
PhosphoSiteiP39032.

Proteomic databases

PaxDbiP39032.
PRIDEiP39032.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi58927.
KEGGirno:58927.

Organism-specific databases

CTDi25873.
RGDi62085. Rpl36.

Phylogenomic databases

eggNOGiKOG3452. Eukaryota.
COG5051. LUCA.
HOGENOMiHOG000155312.
HOVERGENiHBG002152.
InParanoidiP39032.
KOiK02920.
OrthoDBiEOG7FV3T1.
PhylomeDBiP39032.

Miscellaneous databases

PROiP39032.

Family and domain databases

InterProiIPR000509. Ribosomal_L36e.
[Graphical view]
PANTHERiPTHR10114. PTHR10114. 1 hit.
PfamiPF01158. Ribosomal_L36e. 1 hit.
[Graphical view]
PROSITEiPS01190. RIBOSOMAL_L36E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 2-40.
    Strain: Sprague-Dawley.
    Tissue: Liver.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Pituitary.

Entry informationi

Entry nameiRL36_RAT
AccessioniPrimary (citable) accession number: P39032
Secondary accession number(s): Q6PDV5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: January 23, 2007
Last modified: June 8, 2016
This is version 89 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.