Uncharacterized protein YHR097C - Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

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P38809 (YHP7_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified May 29, 2013. Version 77. History...

Clusters with 100%, 90%, 50% identity |

Documents (3) |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
Uncharacterized protein YHR097C

Gene names

Ordered Locus Names:

YHR097C

Organism

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]

Taxonomic identifier

559292 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces ›

Protein attributes

Sequence length	366 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Subcellular location	Cytoplasm. Nucleus Ref.5.
Sequence similarities	Belongs to the pal1 family.

Ontologies

Keywords
Cellular component	Cytoplasm Nucleus
PTM	Isopeptide bond Phosphoprotein Ubl conjugation
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	cytoplasm Inferred from direct assay Ref.5. Source: SGD nucleus Inferred from direct assay Ref.5. Source: SGD
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 366

366

Uncharacterized protein YHR097C

PRO_0000202907

Amino acid modifications

Modified residue

Phosphothreonine Ref.4

Modified residue

Phosphoserine Ref.8

Modified residue

Phosphoserine Ref.8 Ref.9

Modified residue

Phosphothreonine Ref.4

Modified residue

189

Phosphothreonine Ref.6 Ref.8 Ref.9

Modified residue

205

Phosphothreonine Ref.4

Modified residue

221

Phosphoserine Ref.4 Ref.8

Modified residue

222

Phosphoserine Ref.3 Ref.8 Ref.9

Modified residue

223

Phosphothreonine Ref.4 Ref.8 Ref.9

Modified residue

224

Phosphothreonine Ref.3

Modified residue

288

Phosphoserine Ref.7

Modified residue

294

Phosphoserine Ref.7

Modified residue

297

Phosphoserine Ref.7

Modified residue

313

Phosphothreonine Ref.9

Modified residue

315

Phosphoserine Ref.7 Ref.9

Modified residue

359

Phosphoserine Ref.7

Cross-link

Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) Ref.4

Cross-link

187

Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) Ref.4

Cross-link

242

Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) Ref.4

Sequences

Sequence

Length

Mass (Da)

Tools

P38809 [UniParc].

Last modified February 1, 1995. Version 1.
Checksum: AD04D034CBD6764D
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FASTA

366

40,663

        10         20         30         40         50         60 
MNQTGRTIGG PQNGVNTVIN PFRVSPSEDR VSSRDETPRN YNNPFLNEDD TRRAHNSSVS 

        70         80         90        100        110        120 
NSRQERLPSY EEAAGTPKQQ APYPKEKKRS SGSNSHQHNH HHHRRTSHGH RDKDKQKSKS 

       130        140        150        160        170        180 
RTKVKPPKNV DTIDKMDVTG LFGGSFHHDG PFDACTPQRN KNNKVAPVLA FPADGPNNTV 

       190        200        210        220        230        240 
GGRTSKKSTL DEVFGRETVD DDSETLNQLQ DRAYLFNKAN SSTTTLDAIK PNSKNITQFD 

       250        260        270        280        290        300 
SKMKTELVHG PITMGLGSTT FLDGAPASSA AIEQDVINHA QESRRKNSIA RKKSLPSRRH 

       310        320        330        340        350        360 
LQVNNNNLKL VKTHSGHLEQ KDVDDNRTSV PVTATQGSGH EDVVKKENTG NKLLRRVKSL 


KTSKKH

« Hide

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII." Johnston M., Andrews S., Brinkman R., Cooper J., Ding H., Dover J., Du Z., Favello A., Fulton L., Gattung S., Geisel C., Kirsten J., Kucaba T., Hillier L.W., Jier M., Johnston L., Langston Y., Latreille P. Vaudin M. Science 265:2077-2082(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204511 / S288c / AB972.
[2]	Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c.
[3]	"Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae." Ficarro S.B., McCleland M.L., Stukenberg P.T., Burke D.J., Ross M.M., Shabanowitz J., Hunt D.F., White F.M. Nat. Biotechnol. 20:301-305(2002) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-222 AND THR-224, MASS SPECTROMETRY. Strain: 2124.
[4]	"A proteomics approach to understanding protein ubiquitination." Peng J., Schwartz D., Elias J.E., Thoreen C.C., Cheng D., Marsischky G., Roelofs J., Finley D., Gygi S.P. Nat. Biotechnol. 21:921-926(2003) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-7; THR-76; THR-205; SER-221 AND THR-223, UBIQUITINATION AT LYS-78; LYS-187 AND LYS-242, MASS SPECTROMETRY. Strain: SUB592.
[5]	"Global analysis of protein localization in budding yeast." Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K. Nature 425:686-691(2003) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
[6]	"Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae." Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J., Elias J.E., Gygi S.P. J. Proteome Res. 6:1190-1197(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-189, MASS SPECTROMETRY. Strain: ADR376.
[7]	"Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry." Chi A., Huttenhower C., Geer L.Y., Coon J.J., Syka J.E.P., Bai D.L., Shabanowitz J., Burke D.J., Troyanskaya O.G., Hunt D.F. Proc. Natl. Acad. Sci. U.S.A. 104:2193-2198(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-288; SER-294; SER-297; SER-315 AND SER-359, MASS SPECTROMETRY.
[8]	"Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases." Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H. Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-25; SER-69; THR-189; SER-221; SER-222 AND THR-223, MASS SPECTROMETRY.
[9]	"A multidimensional chromatography technology for in-depth phosphoproteome analysis." Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H. Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-69; THR-189; SER-222; THR-223; THR-313 AND SER-315, MASS SPECTROMETRY.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00060 Genomic DNA. Translation: AAB68935.1. BK006934 Genomic DNA. Translation: DAA06791.1.
PIR	S46727.
RefSeq	NP_011965.1. NM_001179227.1.
3D structure databases
ProteinModelPortal	P38809.
ModBase	Search...
Protein-protein interaction databases
IntAct	P38809. 4 interactions.
MINT	MINT-2493769.
STRING	4932.YHR097C.
Proteomic databases
PaxDb	P38809.
PeptideAtlas	P38809.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblFungi	YHR097C; YHR097C; YHR097C.
GeneID	856497.
KEGG	sce:YHR097C.
Organism-specific databases
CYGD	YHR097c.
SGD	S000001139. YHR097C.
Phylogenomic databases
eggNOG	NOG69048.
GeneTree	ENSGT00530000067275.
HOGENOM	HOG000246727.
OrthoDB	EOG476P8R.
Enzyme and pathway databases
BioCyc	YEAST:G3O-31142-MONOMER.
Gene expression databases
Genevestigator	P38809.
GermOnline	YHR097C. Saccharomyces cerevisiae.
Family and domain databases
InterPro	IPR013226. Pal1. [Graphical view]
Pfam	PF08316. Pal1. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	982209.

Entry information

Entry name

YHP7_YEAST

Accession

Primary (citable) accession number: P38809
Secondary accession number(s): D3DL47

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 1, 1995
Last sequence update:	February 1, 1995
Last modified:	May 29, 2013
This is version 77 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Fungal Protein Annotation Program

Relevant documents

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Yeast chromosome VIII

Yeast (Saccharomyces cerevisiae) chromosome VIII: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Molecule processing

Amino acid modifications

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Enzyme and pathway databases

Gene expression databases

Family and domain databases

Other

Entry information

Relevant documents