P38795 (NADE_YEAST) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 29, 2013.
Version 114.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Glutamine-dependent NAD(+) synthetase EC=6.3.5.1 Alternative name(s): NAD(+) synthase [glutamine-hydrolyzing] | ||||
| Gene names |
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| Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome] | ||||
| Taxonomic identifier | 559292 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces › ![]() |
Protein attributes
| Sequence length | 714 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Catalytic activity | ATP + deamido-NAD+ + L-glutamine + H2O = AMP + diphosphate + NAD+ + L-glutamate. |
| Pathway | Cofactor biosynthesis; NAD(+) biosynthesis; NAD(+) from deamido-NAD(+) (L-Gln route): step 1/1. |
| Miscellaneous | Present with 172 molecules/cell in log phase SD medium. |
| Sequence similarities | In the C-terminal section; belongs to the NAD synthetase family. Contains 1 CN hydrolase domain. |
Ontologies
| Keywords | |
|---|---|
| Ligand | ATP-binding NAD Nucleotide-binding |
| Molecular function | Ligase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | NAD biosynthetic process Inferred from direct assay PubMed 12771147PubMed 12898714. Source: SGD |
| Cellular_component | cytoplasm Inferred from direct assay PubMed 12898714. Source: SGD nucleusInferred from direct assay PubMed 12898714. Source: SGD |
| Molecular_function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW NAD+ synthase (glutamine-hydrolyzing) activityInferred from direct assay PubMed 12771147PubMed 12898714. Source: SGD hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidesInferred from mutant phenotype PubMed 12771147. Source: SGD |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| itself | 3 | EBI-11799,EBI-11799 |
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII." Johnston M., Andrews S., Brinkman R., Cooper J., Ding H., Dover J., Du Z., Favello A., Fulton L., Gattung S., Geisel C., Kirsten J., Kucaba T., Hillier L.W., Jier M., Johnston L., Langston Y., Latreille P. Vaudin M.Science 265:2077-2082(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204511 / S288c / AB972. |
| [2] | Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c. |
| [3] | "Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | U10556 Genomic DNA. Translation: AAB68889.1. BK006934 Genomic DNA. Translation: DAA06768.1. |
| PIR | S46811. |
| RefSeq | NP_011941.1. NM_001179204.1. |
3D structure databases | |
| ProteinModelPortal | P38795. |
| SMR | P38795. Positions 4-663. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-5592N. |
| IntAct | P38795. 2 interactions. |
| MINT | MINT-479617. |
| STRING | 4932.YHR074W. |
Proteomic databases | |
| PaxDb | P38795. |
| PeptideAtlas | P38795. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblFungi | YHR074W; YHR074W; YHR074W. |
| GeneID | 856473. |
| KEGG | sce:YHR074W. |
Organism-specific databases | |
| CYGD | YHR074w. |
| SGD | S000001116. QNS1. |
Phylogenomic databases | |
| eggNOG | COG0388. |
| GeneTree | ENSGT00390000010152. |
| HOGENOM | HOG000160137. |
| KO | K01950. |
| OMA | DFALSCH. |
| OrthoDB | EOG4XKZG2. |
Enzyme and pathway databases | |
| BioCyc | YEAST:MONOMER3O-845. |
| UniPathway | UPA00253; UER00334. |
Gene expression databases | |
| Genevestigator | P38795. |
| GermOnline | YHR074W. Saccharomyces cerevisiae. |
Family and domain databases | |
| Gene3D | 3.40.50.620. 1 hit. 3.60.110.10. 1 hit. |
| InterPro | IPR003010. C-N_Hydrolase. IPR014445. Gln-dep_NAD_synthase. IPR022310. NAD/GMP_synthase. IPR003694. NAD_synthase. IPR014729. Rossmann-like_a/b/a_fold. [Graphical view] |
| Pfam | PF00795. CN_hydrolase. 1 hit. PF02540. NAD_synthase. 1 hit. [Graphical view] |
| PIRSF | PIRSF006630. NADS_GAT. 1 hit. |
| SUPFAM | SSF56317. Ntlse/CNhydtse. 1 hit. |
| TIGRFAMs | TIGR00552. nadE. 1 hit. |
| PROSITE | PS50263. CN_HYDROLASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 982143. |
Entry information
| Entry name | NADE_YEAST | ||||||||
| Accession | Primary (citable) accession number: P38795 Secondary accession number(s): D3DL24 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Fungal Protein Annotation Program | ||||||||
Relevant documents
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| Yeast chromosome VIII Yeast (Saccharomyces cerevisiae) chromosome VIII: entries and gene names |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with
