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P38770

- BRL1_YEAST

UniProt

P38770 - BRL1_YEAST

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Protein
Nucleus export protein BRL1
Gene
BRL1, YHR036W
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Involved in mRNA and protein export from nucleus.1 Publication

GO - Biological processi

  1. mRNA export from nucleus Source: SGD
  2. nuclear envelope organization Source: SGD
  3. protein export from nucleus Source: SGD
Complete GO annotation...

Keywords - Biological processi

mRNA transport, Protein transport, Transport

Enzyme and pathway databases

BioCyciYEAST:G3O-31096-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleus export protein BRL1
Alternative name(s):
BRR6-like protein 1
Gene namesi
Name:BRL1
Ordered Locus Names:YHR036W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome VIII

Organism-specific databases

CYGDiYHR036w.
SGDiS000001078. BRL1.

Subcellular locationi

Nucleus membrane; Multi-pass membrane protein 1 Publication

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 299299Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei300 – 32021Helical; Reviewed prediction
Add
BLAST
Topological domaini321 – 40787Perinuclear space Reviewed prediction
Add
BLAST
Transmembranei408 – 42821Helical; Reviewed prediction
Add
BLAST
Topological domaini429 – 47143Cytoplasmic Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. endoplasmic reticulum Source: SGD
  2. integral component of membrane Source: UniProtKB-KW
  3. nuclear envelope Source: SGD
  4. nuclear membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Membrane, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 471471Nucleus export protein BRL1
PRO_0000202892Add
BLAST

Proteomic databases

MaxQBiP38770.
PaxDbiP38770.

Expressioni

Gene expression databases

GenevestigatoriP38770.

Interactioni

Subunit structurei

Interacts with BRR6.1 Publication

Protein-protein interaction databases

BioGridi36467. 13 interactions.
DIPiDIP-5580N.
IntActiP38770. 12 interactions.
MINTiMINT-526264.
STRINGi4932.YHR036W.

Structurei

3D structure databases

ProteinModelPortaliP38770.

Family & Domainsi

Sequence similaritiesi

Belongs to the BRL1/BRR6 family.

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG5085.
HOGENOMiHOG000095263.
OMAiTHTEATE.
OrthoDBiEOG7RRFK5.

Family and domain databases

InterProiIPR018767. Brl1/Brr6_dom.
[Graphical view]
PfamiPF10104. Brr6_like_C_C. 1 hit.
[Graphical view]
SMARTiSM01042. Brr6_like_C_C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P38770-1 [UniParc]FASTAAdd to Basket

« Hide

MESFENLSIR DSFTSGMEHV DEELGGLSDL SISKQGPTLS PQLINRFMPH    50
FPSSPSPLRN TLDFSAAKAD EEEDDRMEID EVDDTSFEEE YNNEPIETHT 100
EATENAVVEE IEATPEERQK QEKNESQDQS VEEVENIVSP HRSTVIKALL 150
SPTDLGVAAA TKVEGVVPLP PSANQDDNES SNNNAEGEDI IRNEEVEDEI 200
KSSLGNHKSS QYANAFDSEI IKRELRSRSK YQPIQVSFNT HNYFYSDKDG 250
IKTYSLTKPN HNKIDEFYDQ NEAFKLPKPW SPNSHPASRA SYALMSYLQL 300
FLNAITTVVI FSFILSFIIA LQKDLKSTWE QRKHELQYES RICQEQYLTN 350
RCNQTPGLPA LGEQCAIWKQ CMDRNNDIFF RARSTLSAKL FGDIINSFID 400
PLNWKTLFVI FCGVITWCFS SNFLLGFVRA KSYYGNGIKT YPLPSSPKSP 450
TSEETHSSMT ASGEDSHLLK Q 471
Length:471
Mass (Da):53,385
Last modified:February 1, 1995 - v1
Checksum:i732209EC74DE3463
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00062 Genomic DNA. Translation: AAB68908.1.
BK006934 Genomic DNA. Translation: DAA06727.1.
PIRiS46739.
RefSeqiNP_011901.1. NM_001179166.1.

Genome annotation databases

EnsemblFungiiYHR036W; YHR036W; YHR036W.
GeneIDi856431.
KEGGisce:YHR036W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00062 Genomic DNA. Translation: AAB68908.1 .
BK006934 Genomic DNA. Translation: DAA06727.1 .
PIRi S46739.
RefSeqi NP_011901.1. NM_001179166.1.

3D structure databases

ProteinModelPortali P38770.
ModBasei Search...

Protein-protein interaction databases

BioGridi 36467. 13 interactions.
DIPi DIP-5580N.
IntActi P38770. 12 interactions.
MINTi MINT-526264.
STRINGi 4932.YHR036W.

Proteomic databases

MaxQBi P38770.
PaxDbi P38770.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YHR036W ; YHR036W ; YHR036W .
GeneIDi 856431.
KEGGi sce:YHR036W.

Organism-specific databases

CYGDi YHR036w.
SGDi S000001078. BRL1.

Phylogenomic databases

eggNOGi COG5085.
HOGENOMi HOG000095263.
OMAi THTEATE.
OrthoDBi EOG7RRFK5.

Enzyme and pathway databases

BioCyci YEAST:G3O-31096-MONOMER.

Miscellaneous databases

NextBioi 982021.

Gene expression databases

Genevestigatori P38770.

Family and domain databases

InterProi IPR018767. Brl1/Brr6_dom.
[Graphical view ]
Pfami PF10104. Brr6_like_C_C. 1 hit.
[Graphical view ]
SMARTi SM01042. Brr6_like_C_C. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
  4. "Brl1p - a novel nuclear envelope protein required for nuclear transport."
    Saitoh Y.-H., Ogawa K., Nishimoto T.
    Traffic 6:502-517(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH BRR6.
  5. "A global topology map of the Saccharomyces cerevisiae membrane proteome."
    Kim H., Melen K., Oesterberg M., von Heijne G.
    Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
    Strain: ATCC 208353 / W303-1A.
  6. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiBRL1_YEAST
AccessioniPrimary (citable) accession number: P38770
Secondary accession number(s): D3DKY3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: May 14, 2014
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 1280 molecules/cell in log phase SD medium.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome VIII
    Yeast (Saccharomyces cerevisiae) chromosome VIII: entries and gene names

External Data

Dasty 3

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