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Reviewed, UniProtKB/Swiss-Prot P38747 (OTU2_YEAST)

Last modified November 24, 2009. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    OTU domain-containing protein 2
Gene names
Name: OTU2
Ordered Locus Names: YHL013C
OrganismSaccharomyces cerevisiae (Baker's yeast) [Complete proteome]
Taxonomic identifier4932 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length307 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Miscellaneous

Present with 172 molecules/cell in log phase SD medium. Ref.3

Sequence similarities

Contains 1 OTU domain.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentcytoplasm

Inferred from direct assay. Source: SGD

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 307307OTU domain-containing protein 2
PRO_0000202883

Regions

Domain167 – 307141OTU

Sequences

Sequence LengthMass (Da)Tools
P38747-1 [UniParc].

Last modified February 1, 1995. Version 1.
Checksum: 5580BF0459B78395

FASTA30736,113
        10         20         30         40         50         60 
MTGMESGENL ENMEDILARH RKENKDLQNK ITGMKKQATK SKRKEVNSKC LDLQDKLKTK 

        70         80         90        100        110        120 
QENEIRDWKI ANNEVFDAEQ EDEVTPEKLL EQLSISRDEK EQQNVPVQQQ QQGQTKKRRN 

       130        140        150        160        170        180 
RQKERLAKRD AAIAKMKEEA ALEASKQPDL KKMEQESIDQ LCELKKLKQF DIQPDGHCLF 

       190        200        210        220        230        240 
ASILDQLKLR HDPKKLDQDM DVMKLRWLSC NYVQEHRDDF IPYLFDEETM KMKDIDEYTK 

       250        260        270        280        290        300 
EMEHTAQWGG EIEILALSHV FDCPISILMS GRPIQVYNEC GKNPELKLVY YKHSYALGEH 


YNSLHDS 

« Hide

References

« Hide 'large scale' references
[1]"Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII."
Johnston M., Andrews S., Brinkman R., Cooper J., Ding H., Dover J., Du Z., Favello A., Fulton L., Gattung S., Geisel C., Kirsten J., Kucaba T., Hillier L.W., Jier M., Johnston L., Langston Y., Latreille P. expand/collapse author list , Louis E.J., Macri C., Mardis E., Menezes S., Mouser L., Nhan M., Rifkin L., Riles L., St Peter H., Trevaskis E., Vaughan K., Vignati D., Wilcox L., Wohldman P., Waterston R., Wilson R., Vaudin M.
Science 265:2077-2082(1994) [PubMed: 8091229] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204511 / S288c / AB972.
[2]"Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae."
Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. expand/collapse author list , Simpson A.J.G., Bulyk M.L., Harlow E., Marsischky G., Kolodner R.D., LaBaer J.
Genome Res. 17:536-543(2007) [PubMed: 17322287] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[3]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed: 14562106] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

U11582 Genomic DNA. Translation: AAB65066.1.
AY692608 Genomic DNA. Translation: AAT92627.1.
PIRS46827.
RefSeqNP_011850.1.

3D structure databases

ModBaseSearch...

Proteomic databases

PeptideAtlasP38747.
PRIDEP38747.

Genome annotation databases

EnsemblYHL013C; YHL013C; YHL013C; Saccharomyces cerevisiae. [Genome view]
GeneID856373.
KEGGsce:YHL013C.
NMPDRfig|4932.3.peg.2990.

Organism-specific databases

CYGDYHL013c.
SGDS000001005. OTU2.

Phylogenomic databases

HOGENOMP38747.
OMAVEMGKEY
OrthoDBEOG954BFX

Gene expression databases

ArrayExpressP38747.
GenevestigatorP38747.
GermOnlineYHL013C. Saccharomyces cerevisiae.

Family and domain databases

InterProIPR003323. OTU.
[Graphical view]
PfamPF02338. OTU. 1 hit.
[Graphical view]
PROSITEPS50802. OTU. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio981855.

Entry information

Entry nameOTU2_YEAST
AccessionPrimary (citable) accession number: P38747
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: November 24, 2009
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectFPAP (Fungal Proteome Annotation Project)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Yeast chromosome VIII

Yeast (Saccharomyces cerevisiae) chromosome VIII: entries and gene names

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents